RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 GINS2Q9Y248 185 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 NDUFAF1Q9Y375 327 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 MGAMO43451 1857 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 A2MP01023 1474 aa1.17□□□□□ -2.22
CASC4-206ENST00000558847 COL24A1Q17RW2 1714 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 A0A0J9YY99 117 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 EFNA4P52798 201 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 HRCT1Q6UXD1 115 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 AP1S3Q96PC3 154 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 CIB3Q96Q77 187 aaPredicted RBP1.16□□□□□ -2.22
CASC4-206ENST00000558847 MRPL40Q9NQ50 206 aaKnown RBP1.16□□□□□ -2.22
CASC4-206ENST00000558847 TRAPPC2LQ9UL33 140 aa1.16□□□□□ -2.22
CASC4-206ENST00000558847 ERBINQ96RT1 1412 aa1.15□□□□□ -2.22
CASC4-206ENST00000558847 RPL7P18124 248 aaKnown RBP1.15□□□□□ -2.23
CASC4-206ENST00000558847 DNAJB13P59910 316 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 OR5A2Q8NGI9 324 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 CLEC2BQ92478 149 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 TAF9BQ9HBM6 251 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 TCOF1Q13428 1488 aaKnown RBP1.15□□□□□ -2.23
CASC4-206ENST00000558847 N4BP2Q86UW6 1770 aaPredicted RBP1.15□□□□□ -2.23
CASC4-206ENST00000558847 UNC13CQ8NB66 2214 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 DLC1Q96QB1 1528 aa1.15□□□□□ -2.23
CASC4-206ENST00000558847 MYO18AQ92614 2054 aaKnown RBP1.14□□□□□ -2.23
CASC4-206ENST00000558847 PLXNA4Q9HCM2 1894 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 COL1A1P02452 1464 aaPredicted RBP1.14□□□□□ -2.23
CASC4-206ENST00000558847 TRAV23DV6A0A075B6W5 121 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 LOC107984640A0A0U1RRK4 108 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 C3orf85A0A1B0GTC6 90 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 SULT1C4O75897 302 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 NBEAP1P0C6P0 100 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 RPL22P35268 128 aaKnown RBP1.14□□□□□ -2.23
CASC4-206ENST00000558847 ETV6P41212 452 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 IZUMO2Q6UXV1 221 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 TEX29Q8N6K0 151 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 TMEM229BQ8NBD8 167 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 CBLN4Q9NTU7 201 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 ALPK3Q96L96 1907 aa1.14□□□□□ -2.23
CASC4-206ENST00000558847 J3KT08 172 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 CRYGSP22914 178 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 C5orf17Q8NAS9 161 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 NAT14Q8WUY8 206 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 MPC1Q9Y5U8 109 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 E9PCH4 1651 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 MED12Q93074 2177 aa1.13□□□□□ -2.23
CASC4-206ENST00000558847 A6NN06 94 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 IFITM5A6NNB3 132 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 BBIP1A8MTZ0 92 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 RPS3P23396 243 aaKnown RBP eCLIP1.12□□□□□ -2.23
CASC4-206ENST00000558847 FOXA3P55318 350 aaPredicted RBP1.12□□□□□ -2.23
CASC4-206ENST00000558847 NEDD8Q15843 81 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 ZCCHC23Q6ZST2 131 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 Q8N6K4 173 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 PYDC1Q8WXC3 89 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 C19orf12Q9NSK7 152 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 SIP14410 1827 aa1.12□□□□□ -2.23
CASC4-206ENST00000558847 SNRNP200O75643 2136 aaKnown RBP1.12□□□□□ -2.23
CASC4-206ENST00000558847 UQCRQO14949 82 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 IGHV3-30P01768 117 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 IGHV3-30-5P0DP03 117 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 ASB16-AS1Q495Z4 193 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 OCIAD2Q56VL3 154 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 AKAP14Q86UN6 197 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 SBSPONQ8IVN8 264 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 OR8I2Q8N0Y5 310 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 C10orf111Q8N326 155 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 TCTEX1D1Q8N7M0 179 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 NABP2Q9BQ15 211 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 NIT2Q9NQR4 276 aa1.11□□□□□ -2.23
CASC4-206ENST00000558847 NUP210Q8TEM1 1887 aaPredicted RBP1.1□□□□□ -2.23
CASC4-206ENST00000558847 ASCC3Q8N3C0 2202 aaKnown RBP1.1□□□□□ -2.23
CASC4-206ENST00000558847 A0A1B0GX51 115 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 DPM2O94777 84 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 HBDP02042 147 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 PDE6GP18545 87 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 BLCAPP62952 87 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 PSPHP78330 225 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 OR51A4Q8NGJ6 313 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 BRK1Q8WUW1 75 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 AIF1LQ9BQI0 150 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 PTPRFP10586 1907 aa1.1□□□□□ -2.23
CASC4-206ENST00000558847 MED23Q9ULK4 1368 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 FAM135BQ49AJ0 1406 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 BORCS7-ASMTA0A0B4J1R7 106 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 PNMA8CA0A1B0GUJ8 204 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 GYPBP06028 91 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 SLC25A4P12235 298 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 FXYD4P59646 89 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 C3orf62Q6ZUJ4 267 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 MAGOHBQ96A72 148 aaKnown RBP1.09□□□□□ -2.23
CASC4-206ENST00000558847 SMIM7Q9BQ49 75 aa1.09□□□□□ -2.23
CASC4-206ENST00000558847 CHD3Q12873 2000 aaKnown RBP1.09□□□□□ -2.24
CASC4-206ENST00000558847 CNTRLQ7Z7A1 2325 aa1.09□□□□□ -2.24
CASC4-206ENST00000558847 OVOS2A0A0G2JMS6 1433 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 TRAV36DV7A0A075B6V5 113 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 A0A1W2PPB8 328 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 A0A1W2PRS3 328 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 KIR3DP1A8MWS1 328 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 DEGS1O15121 323 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 DBIP07108 87 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms