RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 TIMM8BQ9Y5J9 83 aaPredicted RBP8.19□□□□□ -1.1
CUX1-217ENST00000558836 SERTM2A0A1B0GWG4 89 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 NDUFS8O00217 210 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 CSN3P07498 182 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 PSG9Q00887 426 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 SRSF1Q07955 248 aaKnown RBP eCLIP8.19□□□□□ -1.1
CUX1-217ENST00000558836 CT83Q5H943 113 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 NIT1Q86X76 327 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 ATOH7Q8N100 152 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 IGKV3-7A0A075B6H7 116 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 SH2D1AO60880 128 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 HSBP1O75506 76 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 PF4V1P10720 104 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 KRTAP10-9P60411 292 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 DNLZQ5SXM8 178 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 UNQ9165/PRO28630Q6UXU0 137 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 PRR25Q96S07 402 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 TENM4Q6N022 2769 aa8.18□□□□□ -1.1
CUX1-217ENST00000558836 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
CUX1-217ENST00000558836 DEFB1P60022 68 aa8.18□□□□□ -1.1
CUX1-217ENST00000558836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.18□□□□□ -1.1
CUX1-217ENST00000558836 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
CUX1-217ENST00000558836 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 Q6ZQT7 251 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 GFRA4Q9GZZ7 299 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 CLEC5AQ9NY25 188 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 PRRC2AP48634 2157 aaKnown RBP8.17□□□□□ -1.1
CUX1-217ENST00000558836 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 TMEM189A5PLL7 270 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 M0R2Z0 102 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
CUX1-217ENST00000558836 PPIFP30405 207 aaKnown RBP8.17□□□□□ -1.1
CUX1-217ENST00000558836 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 METTL26Q96S19 204 aa8.17□□□□□ -1.1
CUX1-217ENST00000558836 B4DSR2 109 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 TGFAP01135 160 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 ARL3P36405 182 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 ZNF843Q8N446 348 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 Q8N976 141 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 OR4B1Q8NGF8 309 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 ACANP16112 2415 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 LOC102724200A0A096LPH7 203 aaPredicted RBP8.16□□□□□ -1.1
CUX1-217ENST00000558836 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 EREGO14944 169 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 FAM162BQ5T6X4 162 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 C10orf99Q6UWK7 81 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 IL17RELQ6ZVW7 336 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 BORCS7Q96B45 105 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 SMAD7O15105 426 aaKnown RBP8.16□□□□□ -1.1
CUX1-217ENST00000558836 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 ORM1P02763 201 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
CUX1-217ENST00000558836 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.15□□□□□ -1.1
CUX1-217ENST00000558836 A6NDX4 124 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 HAX1O00165 279 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 EDN2P20800 178 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 RPL11P62913 178 aaKnown RBP8.15□□□□□ -1.1
CUX1-217ENST00000558836 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 C1orf194Q5T5A4 169 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.1
CUX1-217ENST00000558836 MCRIP2Q9BUT9 160 aaKnown RBP8.15□□□□□ -1.1
CUX1-217ENST00000558836 TRAV8-2A0A0B4J237 113 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 FAM231BA6NCW3 169 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 RNF223E7ERA6 249 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 KLF5Q13887 457 aaPredicted RBP8.15□□□□□ -1.11
CUX1-217ENST00000558836 C8orf86Q6ZUL3 223 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 NDUFAF3Q9BU61 184 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 ITPR3Q14573 2671 aa8.15□□□□□ -1.11
CUX1-217ENST00000558836 COX6B1P14854 86 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 SRD5A1P18405 259 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 VAMP8Q9BV40 100 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 MSRB1Q9NZV6 116 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 H0Y8G0 127 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 IGHG2P01859 326 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 ZNF705AQ6ZN79 300 aaPredicted RBP8.14□□□□□ -1.11
CUX1-217ENST00000558836 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 AMN1Q8IY45 258 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 GOLT1BQ9Y3E0 138 aa8.14□□□□□ -1.11
CUX1-217ENST00000558836 FAM181BA6NEQ2 426 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 IGF1P05019 195 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 RIGQ13278 110 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 SPATA12Q7Z6I5 190 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 FLNAP21333 2647 aaKnown RBP8.13□□□□□ -1.11
CUX1-217ENST00000558836 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 FXYD7P58549 80 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 OR4X2Q8NGF9 303 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 HELZ2Q9BYK8 2649 aaKnown RBP8.13□□□□□ -1.11
CUX1-217ENST00000558836 TWIST1Q15672 202 aa8.13□□□□□ -1.11
CUX1-217ENST00000558836 KLK9Q2XQG4 91 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms