RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 RARRES2Q99969 163 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 VGLL1Q99990 258 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 X6R8D5 127 aa11.22□□□□□ -0.61
LINC01220-201ENST00000558575 MAP1LC3B2A6NCE7 125 aa11.21□□□□□ -0.61
LINC01220-201ENST00000558575 ZNF705AQ6ZN79 300 aaPredicted RBP11.21□□□□□ -0.61
LINC01220-201ENST00000558575 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
LINC01220-201ENST00000558575 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
LINC01220-201ENST00000558575 MAP1LC3BQ9GZQ8 125 aa11.21□□□□□ -0.61
LINC01220-201ENST00000558575 TMEM167BQ9NRX6 74 aa11.21□□□□□ -0.61
LINC01220-201ENST00000558575 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 BOLA2-SMG1P6H3BVE0 249 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 RBMY1A1P0DJD3 496 aaKnown RBP11.2□□□□□ -0.62
LINC01220-201ENST00000558575 RBMY1CP0DJD4 496 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 RBMY1FQ15415 496 aaKnown RBP11.2□□□□□ -0.62
LINC01220-201ENST00000558575 IL17DQ8TAD2 202 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 FAM213BQ8TBF2 198 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 IGF2BP2-AS1Q96M15 143 aa11.2□□□□□ -0.62
LINC01220-201ENST00000558575 GGTLC3B5MD39 225 aa11.19□□□□□ -0.62
LINC01220-201ENST00000558575 DPPA3Q6W0C5 159 aa11.19□□□□□ -0.62
LINC01220-201ENST00000558575 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
LINC01220-201ENST00000558575 YTHDF2Q9Y5A9 579 aaKnown RBP11.19□□□□□ -0.62
LINC01220-201ENST00000558575 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 SULT1A2P50226 295 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 SUMO1P63165 101 aaKnown RBP11.18□□□□□ -0.62
LINC01220-201ENST00000558575 GNG5P63218 68 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 ARL6IP6Q8N6S5 226 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 Q8NAQ8 132 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 RXFP4Q8TDU9 374 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 SFT2D1Q8WV19 159 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
LINC01220-201ENST00000558575 A0A1W2PRE2 83 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 RBAKDNA6NC62 111 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 DEFB4AO15263 64 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 AMBPP02760 352 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 PRM2P04554 102 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 CDKN1BP46527 198 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 CSN1S1P47710 185 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 EIF5AL1Q6IS14 154 aaKnown RBP11.17□□□□□ -0.62
LINC01220-201ENST00000558575 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
LINC01220-201ENST00000558575 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 FAM74A7A6NL05 159 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 SLC25A5P05141 298 aaKnown RBP11.16□□□□□ -0.62
LINC01220-201ENST00000558575 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 RAB5CP51148 216 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 UBE2G2P60604 165 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 CCL20P78556 96 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 NEU1Q99519 415 aa11.16□□□□□ -0.62
LINC01220-201ENST00000558575 A0A1B0GV50 99 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 CRISP2P16562 243 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 TSPOP30536 169 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 ZNF138P52744 262 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 GOLT1AQ6ZVE7 132 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 Q8TAT8 98 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 RPH3ALQ9UNE2 315 aa11.15□□□□□ -0.62
LINC01220-201ENST00000558575 TRAV8-1A0A0A6YYK1 113 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 KLLNB2CW77 178 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 J3KRW8 73 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 INSP01308 110 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 TCRAP04437 139 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 MIFP14174 115 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 LEPP41159 167 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 PRR9Q5T870 116 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 Q6ZQT7 251 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 TVP23CQ96ET8 276 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
LINC01220-201ENST00000558575 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
LINC01220-201ENST00000558575 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
LINC01220-201ENST00000558575 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
LINC01220-201ENST00000558575 C11orf68Q9H3H3 251 aaKnown RBP11.13□□□□□ -0.63
LINC01220-201ENST00000558575 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 SMIM9A6NGZ8 99 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 ZNF705GA8MUZ8 300 aaPredicted RBP11.12□□□□□ -0.63
LINC01220-201ENST00000558575 PAGE4O60829 102 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
LINC01220-201ENST00000558575 NMBP08949 121 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 AZU1P20160 251 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 BTN1A1Q13410 526 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
LINC01220-201ENST00000558575 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
LINC01220-201ENST00000558575 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
LINC01220-201ENST00000558575 ATP5G3P48201 142 aa11.11□□□□□ -0.63
LINC01220-201ENST00000558575 LINC01587Q99440 93 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms