RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 COMMD3Q9UBI1 195 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 MTFP1Q9UDX5 166 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 TRGV4A0A0C4DH28 118 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 C7orf71A4D174 169 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 SLC17A3O00476 420 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 LECT2O14960 151 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 RAB3DO95716 219 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 IL5P05113 134 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 SNRPCP09234 159 aaKnown RBP4.42□□□□□ -1.7
LRRC28-207ENST00000558500 OR5G3P0C626 314 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 LINC00869P0C866 280 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
LRRC28-207ENST00000558500 TNFSF8P32971 234 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 PLP1P60201 277 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 AKR1C1Q04828 323 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 PATE2Q6UY27 113 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 CYP2G1PQ6ZSU1 146 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 S100A7AQ86SG5 101 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 IQCF2Q8IXL9 164 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 TXNDC17Q9BRA2 123 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 GPR132Q9UNW8 380 aa4.42□□□□□ -1.7
LRRC28-207ENST00000558500 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 RBFOX3A6NFN3 312 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 KLLNB2CW77 178 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 C9JCJ5 164 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 H3BTX0 84 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 MPDU1O75352 247 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 PITX3O75364 302 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 CCNKO75909 580 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 SFTA3P0C7M3 94 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 TAS2R19P59542 299 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 SELENOTP62341 195 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
LRRC28-207ENST00000558500 CD300CQ08708 224 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 BTN1A1Q13410 526 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 LAGE3Q14657 143 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 IZUMO2Q6UXV1 221 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 TMEM229BQ8NBD8 167 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 TMEM37Q8WXS4 190 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 SLC25A31Q9H0C2 315 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 ARV1Q9H2C2 271 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 RNF24Q9Y225 148 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
LRRC28-207ENST00000558500 IGHV1OR15-1A0A075B7D0 117 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 SMCO3A2RU48 225 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 GAGE10A6NGK3 116 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 HPGDSO60760 199 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 GAS8-AS1O95177 125 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 IGHV3-30P01768 117 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 IGHV3-33P01772 117 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 IGHV3-30-3P0DP02 117 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 IGHV3-30-5P0DP03 117 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 RNASE4P34096 147 aaKnown RBP4.4□□□□□ -1.71
LRRC28-207ENST00000558500 PCP4P48539 62 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 PPT1P50897 306 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 ZNF846Q147U1 533 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 FAAP20Q6NZ36 180 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 Q6ZRU5 148 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 C9orf47Q6ZRZ4 202 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 SH2D6Q7Z4S9 175 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 BPIFA4PQ86YQ2 179 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 OR10G4Q8NGN3 311 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 SAT2Q96F10 170 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-207ENST00000558500 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 CIB3Q96Q77 187 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-207ENST00000558500 ARL6Q9H0F7 186 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 PXMP4Q9Y6I8 212 aa4.4□□□□□ -1.71
LRRC28-207ENST00000558500 LOC100131303A0A0U1RQF7 123 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 DISC1C4P0D8 188 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 H3BQ15 152 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 OR4E1P0C645 316 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 IGLC2P0DOY2 106 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 LSM3P62310 102 aaKnown RBP4.39□□□□□ -1.71
LRRC28-207ENST00000558500 NEDD8Q15843 81 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 LINC00305Q7Z4B0 112 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 Q8N976 141 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 NHLRC2Q8NBF2 726 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 OR10P1Q8NGE3 313 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 OR51S1Q8NGJ8 323 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 PAXXQ9BUH6 204 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 VCX3BQ9H321 246 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 RAB26Q9ULW5 256 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
LRRC28-207ENST00000558500 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 TRAV8-3A0A0A6YYJ7 113 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 FAM25AB3EWG3 89 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 FAM25CB3EWG5 89 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 FAM25GB3EWG6 89 aa4.38□□□□□ -1.71
LRRC28-207ENST00000558500 H3BP45 60 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms