RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 HIST1H2BAQ96A08 127 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 AGPAT4-IT1Q9H0P7 198 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 HUWE1Q7Z6Z7 4374 aaKnown RBP7.66□□□□□ -1.18
LRRC28-204ENST00000558172 IGKV2-40A0A087WW87 121 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-204ENST00000558172 TRBV7-9A0A0J9YWB2 115 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 IGKV2D-40P01614 121 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-204ENST00000558172 TCRAP04437 139 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 CT45A10P0DMU9 189 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 LEPP41159 167 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 CDKN1BP46527 198 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF138P52744 262 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 CCL20P78556 96 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 GOLT1AQ6ZVE7 132 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 CCDC28AQ8IWP9 274 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 RNF183Q96D59 192 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 RCHY1Q96PM5 261 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 ATG101Q9BSB4 218 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 SLC35B3Q9H1N7 401 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF492Q9P255 531 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 RPH3ALQ9UNE2 315 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 LENEPQ9Y5L5 61 aa7.66□□□□□ -1.18
LRRC28-204ENST00000558172 SPRY2O43597 315 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 NMBP08949 121 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 GIG44P09565 113 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-204ENST00000558172 GNG5P63218 68 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 ERCC8Q13216 396 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 DEFB135Q30KP9 77 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 CYB561D1Q8N8Q1 229 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 IGF2BP2-AS1Q96M15 143 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 VGLL1Q99990 258 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 XCL2Q9UBD3 114 aa7.65□□□□□ -1.18
LRRC28-204ENST00000558172 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 PEX7O00628 323 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 INSP01308 110 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 PRB4P10163 310 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-204ENST00000558172 CRISP2P16562 243 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 ATP5G3P48201 142 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 FXYD7P58549 80 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 SPINK13Q1W4C9 94 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 ZNF767PQ75MW2 155 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 C20orf144Q9BQM9 153 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 OVOL2Q9BRP0 275 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 VAX2Q9UIW0 290 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 GOLT1BQ9Y3E0 138 aa7.64□□□□□ -1.19
LRRC28-204ENST00000558172 M0R2Z0 102 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-204ENST00000558172 S100A9P06702 114 aaKnown RBP7.63□□□□□ -1.19
LRRC28-204ENST00000558172 GPX1P07203 203 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 BCL2P10415 239 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 RAB14P61106 215 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 MEF2BQ02080 365 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-204ENST00000558172 RARRES2Q99969 163 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 PSG8Q9UQ74 426 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 TGP01266 2768 aa7.63□□□□□ -1.19
LRRC28-204ENST00000558172 TENM3Q9P273 2699 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 RBFOX3A6NFN3 312 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 SMIM9A6NGZ8 99 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 KLLNB2CW77 178 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 PDE6DO43924 150 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 UBE2G1P62253 170 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-204ENST00000558172 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 ZNF705AQ6ZN79 300 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-204ENST00000558172 TMEM256Q8N2U0 113 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 FMC1Q96HJ9 113 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 NEU1Q99519 415 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 KLF12Q9Y4X4 402 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 COL7A1Q02388 2944 aa7.62□□□□□ -1.19
LRRC28-204ENST00000558172 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 TRAV8-1A0A0A6YYK1 113 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 TRBV6-1A0A0K0K1D8 114 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 C7orf71A4D174 169 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
LRRC28-204ENST00000558172 IGLV2-11P01706 119 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 AKR1C3P42330 323 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 PRNTQ86SH4 94 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 C1orf158Q8N1D5 194 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 ZFAND2AQ8N6M9 145 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 Q8TAT8 98 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 C11orf52Q96A22 123 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 NIPSNAP3BQ9BS92 247 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 TMEM208Q9BTX3 173 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 RETNQ9HD89 108 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 TREM1Q9NP99 234 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 ZFP30Q9Y2G7 519 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 U3KQK5 164 aa7.61□□□□□ -1.19
LRRC28-204ENST00000558172 H7BYZ3 331 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 J3KRW8 73 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 MIFP14174 115 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 ZNF506Q5JVG8 444 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms