RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PIGYQ3MUY2 71 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 TTC32Q5I0X7 151 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 COA6Q5JTJ3 125 aaKnown RBP3.6□□□□□ -1.83
RTF1-204ENST00000558117 TMEM69Q5SWH9 247 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 TMEM42Q69YG0 159 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 HAGHLQ6PII5 290 aaPredicted RBP3.6□□□□□ -1.83
RTF1-204ENST00000558117 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
RTF1-204ENST00000558117 TRAPPC6BQ86SZ2 158 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 ZFP82Q8N141 532 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 CCDC54Q8NEL0 328 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 MAFIPQ8WZ33 124 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 LEAP2Q969E1 77 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 ARHGAP5-AS1Q96IT6 56 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 FAAP24Q9BTP7 215 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 LPAR5Q9H1C0 372 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 RBFOX1Q9NWB1 397 aaKnown RBP3.6□□□□□ -1.83
RTF1-204ENST00000558117 RAB22AQ9UL26 194 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 A0A087WTM6 91 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 TMEM235A6NFC5 223 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 TMEM14DPA8MWL7 114 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 GEMIN2O14893 280 aaKnown RBP3.59□□□□□ -1.83
RTF1-204ENST00000558117 PLA2G10O15496 165 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 SSNA1O43805 119 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 ORC5O43913 435 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 CSN2P05814 226 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 CBLN1P23435 193 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 ERP29P30040 261 aaKnown RBP3.59□□□□□ -1.83
RTF1-204ENST00000558117 PRSS3P35030 304 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 ETV6P41212 452 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 INPP1P49441 399 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 AP2S1P53680 142 aaPredicted RBP3.59□□□□□ -1.83
RTF1-204ENST00000558117 GNG3P63215 75 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 C6orf201Q7Z4U5 140 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 LGI3Q8N145 548 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.83
RTF1-204ENST00000558117 CHST6Q9GZX3 395 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 DIABLOQ9NR28 239 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 ZNF230Q9UIE0 474 aaPredicted RBP3.59□□□□□ -1.83
RTF1-204ENST00000558117 PSG11Q9UQ72 335 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 LINC00588Q9Y4M8 146 aa3.59□□□□□ -1.83
RTF1-204ENST00000558117 TRGV10A0A0A0MS01 117 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 A0A1B0GW64 132 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 DEGS1O15121 323 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 OR7C1O76099 320 aaPredicted RBP3.58□□□□□ -1.84
RTF1-204ENST00000558117 CYB5AP00167 134 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 PMP2P02689 132 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 TYMSP04818 313 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 GTF2F2P13984 249 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 NFYBP25208 207 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 NPY1RP25929 384 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 CCR6P51684 374 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 LINC00315P59091 139 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 POLR2GP62487 172 aaKnown RBP eCLIP3.58□□□□□ -1.84
RTF1-204ENST00000558117 MMDQ15546 238 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 GRK1Q15835 563 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 AKIRIN2Q53H80 203 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 Q6ZSA8 131 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 GDPD1Q8N9F7 314 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 STOML3Q8TAV4 291 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 BLNKQ8WV28 456 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 TMEM208Q9BTX3 173 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 PECRQ9BY49 303 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
RTF1-204ENST00000558117 CST11Q9H112 138 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 RHOFQ9HBH0 211 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 COMMD9Q9P000 198 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 AK3Q9UIJ7 227 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 PSG8Q9UQ74 426 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 NEBP20929 6669 aa3.58□□□□□ -1.84
RTF1-204ENST00000558117 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
RTF1-204ENST00000558117 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
RTF1-204ENST00000558117 SMIM26A0A096LP01 95 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 TAAR5O14804 337 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 TCAPO15273 167 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 GSTZ1O43708 216 aaPredicted RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 C1QBP02746 253 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 CD3DP04234 171 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 UBBP0CG47 229 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 HIST1H1DP16402 221 aaKnown RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 RBM11P57052 281 aaKnown RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 GNG2P59768 71 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 RANP62826 216 aaKnown RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 DEFA5Q01523 94 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 AESQ08117 197 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 TMEM267Q0VDI3 215 aaPredicted RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 MORN3Q6PF18 240 aaPredicted RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 PLET1Q6UQ28 207 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 UNQ5815/PRO19632Q6UWF5 114 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 LINC00299Q6ZSB3 139 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 TOMM5Q8N4H5 51 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 SUMF2Q8NBJ7 301 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 NEK7Q8TDX7 302 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 RTN4IP1Q8WWV3 396 aaPredicted RBP3.57□□□□□ -1.84
RTF1-204ENST00000558117 PTX4Q96A99 478 aa3.57□□□□□ -1.84
RTF1-204ENST00000558117 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms