RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 C1QTNF4Q9BXJ3 329 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 RETNQ9HD89 108 aa15.56■□□□□ 0.08
CASC4-204ENST00000557945 IFNA1P01562 189 aa15.55■□□□□ 0.08
CASC4-204ENST00000557945 Q6ZWC4 215 aa15.55■□□□□ 0.08
CASC4-204ENST00000557945 SPATA25Q9BR10 227 aa15.55■□□□□ 0.08
CASC4-204ENST00000557945 TM2D3Q9BRN9 247 aa15.55■□□□□ 0.08
CASC4-204ENST00000557945 ZMAT4Q9H898 229 aa15.55■□□□□ 0.08
CASC4-204ENST00000557945 K7EQM0 130 aa15.54■□□□□ 0.08
CASC4-204ENST00000557945 PCNPQ8WW12 178 aaKnown RBP15.54■□□□□ 0.08
CASC4-204ENST00000557945 RCHY1Q96PM5 261 aa15.54■□□□□ 0.08
CASC4-204ENST00000557945 ATG101Q9BSB4 218 aa15.54■□□□□ 0.08
CASC4-204ENST00000557945 SERTM2A0A1B0GWG4 89 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 C11orf94C9JXX5 98 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 J3KRW8 73 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 PEX7O00628 323 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 AMBPP02760 352 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 NHLRC4P0CG21 123 aaPredicted RBP15.53■□□□□ 0.08
CASC4-204ENST00000557945 TSPOP30536 169 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 LEPP41159 167 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 ZNF138P52744 262 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 CCDC28AQ8IWP9 274 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 CYB561D1Q8N8Q1 229 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 Q8TAT8 98 aa15.53■□□□□ 0.08
CASC4-204ENST00000557945 TRAV12-2A0A075B6T6 113 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 F6UZH7 168 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 SPRY2O43597 315 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 HIST1H2BAQ96A08 127 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 SGK494Q96LW2 274 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 ODF3Q96PU9 254 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 ZNF492Q9P255 531 aa15.52■□□□□ 0.08
CASC4-204ENST00000557945 TRAV8-1A0A0A6YYK1 113 aa15.51■□□□□ 0.07
CASC4-204ENST00000557945 CDKN1BP46527 198 aa15.51■□□□□ 0.07
CASC4-204ENST00000557945 LYPD6BQ8NI32 183 aa15.51■□□□□ 0.07
CASC4-204ENST00000557945 RNF183Q96D59 192 aa15.51■□□□□ 0.07
CASC4-204ENST00000557945 TCEAL7Q9BRU2 100 aa15.51■□□□□ 0.07
CASC4-204ENST00000557945 BCL2P10415 239 aa15.5■□□□□ 0.07
CASC4-204ENST00000557945 PMS2P11Q13670 270 aa15.5■□□□□ 0.07
CASC4-204ENST00000557945 OVOL2Q9BRP0 275 aa15.5■□□□□ 0.07
CASC4-204ENST00000557945 TRAV34A0A0B4J273 112 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 INSP01308 110 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 CSNK1G2-AS1Q8NCQ2 148 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 IGF2BP2-AS1Q96M15 143 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 LINC00479Q96M42 142 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 VAX2Q9UIW0 290 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 PSG8Q9UQ74 426 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 TP53TG1Q9Y2A0 90 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 IGHV3OR16-12A0A075B7B8 117 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 SCO2A0A1W2PP80 73 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 CRXO43186 299 aaPredicted RBP15.49■□□□□ 0.07
CASC4-204ENST00000557945 TAGLN2P37802 199 aaKnown RBP15.49■□□□□ 0.07
CASC4-204ENST00000557945 KIR3DS1Q14943 382 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 PRNTQ86SH4 94 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 TMEM75Q8N9X5 138 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 FAM19A4Q96LR4 140 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 TXNDC17Q9BRA2 123 aa15.49■□□□□ 0.07
CASC4-204ENST00000557945 DNAH9Q9NYC9 4486 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 NMBP08949 121 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 AKR1C3P42330 323 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 RAB14P61106 215 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 MEF2BQ02080 365 aaPredicted RBP15.48■□□□□ 0.07
CASC4-204ENST00000557945 TMEM208Q9BTX3 173 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 GOLT1BQ9Y3E0 138 aa15.48■□□□□ 0.07
CASC4-204ENST00000557945 LOC102723971A0A1B0GUV8 181 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 FBLL1A6NHQ2 334 aaKnown RBP15.47■□□□□ 0.07
CASC4-204ENST00000557945 GPX1P07203 203 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 CRISP2P16562 243 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 FLI1Q01543 452 aaPredicted RBP15.47■□□□□ 0.07
CASC4-204ENST00000557945 IFITM2Q01629 132 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 GFI1BQ5VTD9 330 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 ZNF767PQ75MW2 155 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 OR11H2Q8NH07 326 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 RARRES2Q99969 163 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 NDFIP1Q9BT67 221 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 LENEPQ9Y5L5 61 aa15.47■□□□□ 0.07
CASC4-204ENST00000557945 TRBV7-9A0A0J9YWB2 115 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 RBFOX3A6NFN3 312 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 IGLV2-11P01706 119 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 RNASE4P34096 147 aaKnown RBP15.46■□□□□ 0.07
CASC4-204ENST00000557945 UBE2G1P62253 170 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 ZFAND2AQ8N6M9 145 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 TREM1Q9NP99 234 aa15.46■□□□□ 0.07
CASC4-204ENST00000557945 BTN1A1Q13410 526 aa15.45■□□□□ 0.06
CASC4-204ENST00000557945 NBEAL2Q6ZNJ1 2754 aa15.45■□□□□ 0.06
CASC4-204ENST00000557945 C1orf158Q8N1D5 194 aa15.45■□□□□ 0.06
CASC4-204ENST00000557945 TRAV12-3A0A0B4J271 114 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 C7orf71A4D174 169 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 KLLNB2CW77 178 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 PDE6DO43924 150 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 TOR2AQ5JU69 321 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 TVP23CQ96ET8 276 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 FMC1Q96HJ9 113 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 EIF5A2Q9GZV4 153 aaKnown RBP15.44■□□□□ 0.06
CASC4-204ENST00000557945 U3KQK5 164 aa15.44■□□□□ 0.06
CASC4-204ENST00000557945 RBMY1A1P0DJD3 496 aaKnown RBP15.43■□□□□ 0.06
CASC4-204ENST00000557945 RBMY1CP0DJD4 496 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 RBMY1FQ15415 496 aaKnown RBP15.43■□□□□ 0.06
CASC4-204ENST00000557945 ZNF506Q5JVG8 444 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 PRR9Q5T870 116 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 Q86TA4 180 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 C2CD4CQ8TF44 421 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms