RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RPH3ALQ9UNE2 315 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 GOLT1BQ9Y3E0 138 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 X6R8D5 127 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 IGHV3OR16-12A0A075B7B8 117 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 A0A1W2PRE2 83 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 RBAKDNA6NC62 111 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 SLC25A5P05141 298 aaKnown RBP18.52■□□□□ 0.56
SMAD6-202ENST00000557916 SULT1A2P50226 295 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 UBE2G2P60604 165 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 SUMO1P63165 101 aaKnown RBP18.52■□□□□ 0.56
SMAD6-202ENST00000557916 C1orf158Q8N1D5 194 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 BOLA1Q9Y3E2 137 aa18.52■□□□□ 0.56
SMAD6-202ENST00000557916 A0A0J9YWU9 116 aa18.51■□□□□ 0.55
SMAD6-202ENST00000557916 LEPP41159 167 aa18.51■□□□□ 0.55
SMAD6-202ENST00000557916 A0A1B0GV50 99 aa18.5■□□□□ 0.55
SMAD6-202ENST00000557916 GGTLC3B5MD39 225 aa18.5■□□□□ 0.55
SMAD6-202ENST00000557916 GNG5P63218 68 aa18.5■□□□□ 0.55
SMAD6-202ENST00000557916 C5orf17Q8NAS9 161 aa18.5■□□□□ 0.55
SMAD6-202ENST00000557916 YTHDF2Q9Y5A9 579 aaKnown RBP18.5■□□□□ 0.55
SMAD6-202ENST00000557916 MIFP14174 115 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 GOLT1AQ6ZVE7 132 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 TMEM208Q9BTX3 173 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 ZNF492Q9P255 531 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 J3KRW8 73 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 ZNF138P52744 262 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 KIR3DS1Q14943 382 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 Q8NAQ8 132 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 FAM19A4Q96LR4 140 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 NEU1Q99519 415 aa18.49■□□□□ 0.55
SMAD6-202ENST00000557916 IGHV4-28A0A0C4DH34 117 aa18.48■□□□□ 0.55
SMAD6-202ENST00000557916 FAM74A7A6NL05 159 aa18.48■□□□□ 0.55
SMAD6-202ENST00000557916 NKX6-2Q9C056 277 aaPredicted RBP18.48■□□□□ 0.55
SMAD6-202ENST00000557916 EPDR1Q9UM22 224 aa18.48■□□□□ 0.55
SMAD6-202ENST00000557916 DEFB4AO15263 64 aa18.47■□□□□ 0.55
SMAD6-202ENST00000557916 GFI1BQ5VTD9 330 aa18.47■□□□□ 0.55
SMAD6-202ENST00000557916 Q8TAT8 98 aa18.47■□□□□ 0.55
SMAD6-202ENST00000557916 C11orf68Q9H3H3 251 aaKnown RBP18.47■□□□□ 0.55
SMAD6-202ENST00000557916 SMIM9A6NGZ8 99 aa18.46■□□□□ 0.55
SMAD6-202ENST00000557916 TCRAP04437 139 aa18.46■□□□□ 0.55
SMAD6-202ENST00000557916 RBMY1A1P0DJD3 496 aaKnown RBP18.46■□□□□ 0.55
SMAD6-202ENST00000557916 RBMY1CP0DJD4 496 aa18.46■□□□□ 0.55
SMAD6-202ENST00000557916 RBMY1FQ15415 496 aaKnown RBP18.46■□□□□ 0.55
SMAD6-202ENST00000557916 SERTM2A0A1B0GWG4 89 aa18.45■□□□□ 0.54
SMAD6-202ENST00000557916 IFNA7P01567 189 aa18.45■□□□□ 0.54
SMAD6-202ENST00000557916 CRISP2P16562 243 aa18.45■□□□□ 0.54
SMAD6-202ENST00000557916 ALKAL2Q6UX46 152 aa18.45■□□□□ 0.54
SMAD6-202ENST00000557916 TRAV1-1A0A0B4J248 108 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 KLLNB2CW77 178 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 K7EQM0 130 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 NMBP08949 121 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 TMEM256Q8N2U0 113 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 LINC01587Q99440 93 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 C20orf144Q9BQM9 153 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 ARL2-SNX15V9GYD0 113 aa18.44■□□□□ 0.54
SMAD6-202ENST00000557916 TRAV8-1A0A0A6YYK1 113 aa18.43■□□□□ 0.54
SMAD6-202ENST00000557916 TRBV7-9A0A0J9YWB2 115 aa18.43■□□□□ 0.54
SMAD6-202ENST00000557916 HBE1P02100 147 aa18.43■□□□□ 0.54
SMAD6-202ENST00000557916 GPX1P07203 203 aa18.43■□□□□ 0.54
SMAD6-202ENST00000557916 CST9LP1Q5W188 147 aa18.43■□□□□ 0.54
SMAD6-202ENST00000557916 TRAV12-3A0A0B4J271 114 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 TEX46H3BTG2 121 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 PAGE4O60829 102 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 PPT1P50897 306 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 RRN3P1Q2M238 152 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 ZFAND2AQ8N6M9 145 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 CYB561D1Q8N8Q1 229 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 ATG101Q9BSB4 218 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 LENEPQ9Y5L5 61 aa18.42■□□□□ 0.54
SMAD6-202ENST00000557916 C7orf71A4D174 169 aa18.41■□□□□ 0.54
SMAD6-202ENST00000557916 RNASE4P34096 147 aaKnown RBP18.41■□□□□ 0.54
SMAD6-202ENST00000557916 CCL20P78556 96 aa18.41■□□□□ 0.54
SMAD6-202ENST00000557916 SGK494Q96LW2 274 aa18.41■□□□□ 0.54
SMAD6-202ENST00000557916 NIPSNAP3BQ9BS92 247 aa18.41■□□□□ 0.54
SMAD6-202ENST00000557916 DNAH7Q8WXX0 4024 aa18.41■□□□□ 0.54
SMAD6-202ENST00000557916 ZNF705GA8MUZ8 300 aaPredicted RBP18.4■□□□□ 0.54
SMAD6-202ENST00000557916 H7BYZ3 331 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 MUC7Q8TAX7 377 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 BTN1A1Q13410 526 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 PRR9Q5T870 116 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 CCDC28AQ8IWP9 274 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 IL17DQ8TAD2 202 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 HIST1H2BAQ96A08 127 aa18.4■□□□□ 0.54
SMAD6-202ENST00000557916 LOC102723971A0A1B0GUV8 181 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 PEX7O00628 323 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 PRM2P04554 102 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 HTN1P15515 57 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 ATP5G3P48201 142 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 TAS2R60P59551 318 aa18.39■□□□□ 0.53
SMAD6-202ENST00000557916 TMEM189A5PLL7 270 aa18.38■□□□□ 0.53
SMAD6-202ENST00000557916 TMEM75Q8N9X5 138 aa18.38■□□□□ 0.53
SMAD6-202ENST00000557916 GNG13Q9P2W3 67 aa18.38■□□□□ 0.53
SMAD6-202ENST00000557916 PSG8Q9UQ74 426 aa18.38■□□□□ 0.53
SMAD6-202ENST00000557916 F6UZH7 168 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 IGLV2-11P01706 119 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 EMP1P54849 157 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 FLI1Q01543 452 aaPredicted RBP18.37■□□□□ 0.53
SMAD6-202ENST00000557916 LINC00479Q96M42 142 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 TCEAL7Q9BRU2 100 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 MANBALQ9NQG1 85 aa18.37■□□□□ 0.53
SMAD6-202ENST00000557916 FBLL1A6NHQ2 334 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms