RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
NEDD4-212ENST00000557845 F5H768 121 aa11.76□□□□□ -0.53
NEDD4-212ENST00000557845 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
NEDD4-212ENST00000557845 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
NEDD4-212ENST00000557845 ZNF503Q96F45 646 aa11.76□□□□□ -0.53
NEDD4-212ENST00000557845 C7orf71A4D174 169 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 KLLNB2CW77 178 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 OR7C2O60412 319 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 ZNF324O75467 553 aaPredicted RBP11.75□□□□□ -0.53
NEDD4-212ENST00000557845 RNF212Q495C1 297 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 VGLL1Q99990 258 aa11.75□□□□□ -0.53
NEDD4-212ENST00000557845 IGKV2-40A0A087WW87 121 aaPredicted RBP11.74□□□□□ -0.53
NEDD4-212ENST00000557845 IGKV2D-40P01614 121 aaPredicted RBP11.74□□□□□ -0.53
NEDD4-212ENST00000557845 CRISP2P16562 243 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 RNASE4P34096 147 aaKnown RBP11.74□□□□□ -0.53
NEDD4-212ENST00000557845 RANP62826 216 aaKnown RBP11.74□□□□□ -0.53
NEDD4-212ENST00000557845 CD300CQ08708 224 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 TMEM78Q5T7P6 136 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 LYPD1Q8N2G4 141 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 MED28Q9H204 178 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
NEDD4-212ENST00000557845 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 M0R2N4 97 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 GPX1P07203 203 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 NMBP08949 121 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 TAS2R45P59539 299 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
NEDD4-212ENST00000557845 CSN1S1P47710 185 aa11.72□□□□□ -0.53
NEDD4-212ENST00000557845 UBE2L3P68036 154 aaKnown RBP11.72□□□□□ -0.53
NEDD4-212ENST00000557845 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
NEDD4-212ENST00000557845 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
NEDD4-212ENST00000557845 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
NEDD4-212ENST00000557845 Q9H3A6 140 aa11.72□□□□□ -0.53
NEDD4-212ENST00000557845 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 EIF3GO75821 320 aaKnown RBP eCLIP11.71□□□□□ -0.53
NEDD4-212ENST00000557845 GAGE7O76087 117 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 NUDT3O95989 172 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 M6PRP20645 277 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 ZNF138P52744 262 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
NEDD4-212ENST00000557845 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.53
NEDD4-212ENST00000557845 NACAE9PAV3 2078 aa11.71□□□□□ -0.54
NEDD4-212ENST00000557845 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 A0A1W2PPV4 95 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 RBAKDNA6NC62 111 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 LINC00336Q6ZUF6 198 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 EIF4E3Q8N5X7 224 aaKnown RBP11.7□□□□□ -0.54
NEDD4-212ENST00000557845 C11orf72Q8NBR9 251 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
NEDD4-212ENST00000557845 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 OR5I1Q13606 314 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 ZNF266Q14584 549 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 Q5BKY6 102 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 PRR9Q5T870 116 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 Q6ZQT7 251 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 ZNF680Q8NEM1 530 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 RXFP4Q8TDU9 374 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 AQP10Q96PS8 301 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
NEDD4-212ENST00000557845 PGPA6NDG6 321 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
NEDD4-212ENST00000557845 RAB2AP61019 212 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 Q6ZR54 194 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 Q6ZTI0 123 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 Q8TAT8 98 aa11.68□□□□□ -0.54
NEDD4-212ENST00000557845 RGS13O14921 159 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
NEDD4-212ENST00000557845 HOXA5P20719 270 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 HYLS1Q96M11 299 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 KLF12Q9Y4X4 402 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 DNAH17Q9UFH2 4485 aa11.67□□□□□ -0.54
NEDD4-212ENST00000557845 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 TRAV26-1A0A087WT03 109 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 RTL8CO15255 209 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
NEDD4-212ENST00000557845 CCL18P55774 89 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 FAM74A1Q5RGS3 127 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 HSD17B11Q8NBQ5 300 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 OR2G3Q8NGZ4 309 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 GNPNAT1Q96EK6 184 aaPredicted RBP11.66□□□□□ -0.54
NEDD4-212ENST00000557845 PSMG3Q9BT73 122 aaPredicted RBP11.66□□□□□ -0.54
NEDD4-212ENST00000557845 LENEPQ9Y5L5 61 aa11.66□□□□□ -0.54
NEDD4-212ENST00000557845 A0A0J9YY99 117 aa11.65□□□□□ -0.54
NEDD4-212ENST00000557845 SPINK4O60575 86 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms