RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 E7EUB6 86 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 H3BRN7 92 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 GNG7O60262 68 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 PRB2P02812 416 aaPredicted RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 SLC25A4P12235 298 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 ZNF93P35789 620 aaPredicted RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 BLCAPP62952 87 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 EMX2Q04743 252 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 DIAPH2-AS1Q14236 149 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 GLIPR1L1Q6UWM5 242 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 IGFL3Q6UXB1 125 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 TEN1Q86WV5 123 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 OR5AK2Q8NH90 309 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 SFT2D1Q8WV19 159 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 CLEC2BQ92478 149 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 PRO0461Q9UI25 63 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 NAIPQ13075 1403 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 MYOM3Q5VTT5 1437 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 PRG4Q92954 1404 aaPredicted RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 UACAQ9BZF9 1416 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 CNTLNQ9NXG0 1405 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 GLI3P10071 1580 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 IBTKQ9P2D0 1353 aaPredicted RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 URB2Q14146 1524 aaKnown RBP1.96□□□□□ -2.09
TDP1-217ENST00000557782 ADAMTS7Q9UKP4 1686 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 KIAA1549Q9HCM3 1950 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 MED12LQ86YW9 2145 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 RNF17Q9BXT8 1623 aaKnown RBP1.96□□□□□ -2.1
TDP1-217ENST00000557782 TRAV12-1A0A0B4J245 112 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 TCRBV4S1A1TA0A5B7 111 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 ETV6P41212 452 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 PCBD1P61457 104 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 C2orf82Q6UX34 121 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 FKBP11Q9NYL4 201 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 COMMD3Q9UBI1 195 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 IQGAP2Q13576 1575 aa1.96□□□□□ -2.1
TDP1-217ENST00000557782 CDK13Q14004 1512 aaKnown RBP1.96□□□□□ -2.1
TDP1-217ENST00000557782 KIAA0556O60303 1618 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 LAMC1P11047 1609 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 RAPGEF6Q8TEU7 1601 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 FANCD2Q9BXW9 1451 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 SMG6Q86US8 1419 aaKnown RBP1.95□□□□□ -2.1
TDP1-217ENST00000557782 A0A087WSZ3 146 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 TRAV14DV4A0A0A6YYC5 116 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 TRAV10A0A0B4J240 114 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 PNMA8CA0A1B0GUJ8 204 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 B4DSR2 109 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 F8W036 122 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 YPEL1O60688 119 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 ERC2-IT1O76042 136 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 CCL4P13236 92 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 BRS3P32247 399 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 CKS2P33552 79 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 GUCA1AP43080 201 aaPredicted RBP1.95□□□□□ -2.1
TDP1-217ENST00000557782 SNRPD3P62318 126 aaKnown RBP1.95□□□□□ -2.1
TDP1-217ENST00000557782 TPRXLQ17RH7 258 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 Q1T7F1 81 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 DEFB113Q30KQ7 82 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 ARPINQ7Z6K5 226 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 C10orf111Q8N326 155 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 C4orf3Q8WVX3 66 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 TTTY12Q9BZ98 90 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 TMEM191AQ9H0A3 160 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 CST11Q9H112 138 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 CUL9Q8IWT3 2517 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 MYOM1P52179 1685 aa1.95□□□□□ -2.1
TDP1-217ENST00000557782 ROCK2O75116 1388 aaKnown RBP1.95□□□□□ -2.1
TDP1-217ENST00000557782 COL4A2P08572 1712 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 TNS3Q68CZ2 1445 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 IQGAP1P46940 1657 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 RIMS1Q86UR5 1692 aaKnown RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 FAM236AA0A1B0GUQ0 79 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 FAM236BA0A1B0GV22 79 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 C2orf70A6NJV1 201 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 ZNF670-ZNF695F2Z2N8 137 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 RBP4P02753 201 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 S100PP25815 95 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 ASB16-AS1Q495Z4 193 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 IZUMO2Q6UXV1 221 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 RPS19BP1Q86WX3 136 aaKnown RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 CLECL1Q8IZS7 167 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 ATOH7Q8N100 152 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 ZNF431Q8TF32 576 aaPredicted RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 NABP2Q9BQ15 211 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 SAR1AQ9NR31 198 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 METTL1Q9UBP6 276 aaKnown RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 DNAJC15Q9Y5T4 150 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 EPRSP07814 1512 aaKnown RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 KDM5DQ9BY66 1539 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 NALCNQ8IZF0 1738 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 COL1A1P02452 1464 aaPredicted RBP1.94□□□□□ -2.1
TDP1-217ENST00000557782 PZPP20742 1482 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
TDP1-217ENST00000557782 UNC13BO14795 1591 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 EIF4G3O43432 1585 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms