RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CHAC2Q8WUX2 184 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 C20orf85Q9H1P6 137 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 KLF12Q9Y4X4 402 aa10.93□□□□□ -0.66
SCFD1-224ENST00000557713 TRGV1A0A0A0MS02 117 aa10.92□□□□□ -0.66
SCFD1-224ENST00000557713 SIVA1O15304 175 aa10.92□□□□□ -0.66
SCFD1-224ENST00000557713 PLA2G10O15496 165 aa10.92□□□□□ -0.66
SCFD1-224ENST00000557713 HIST1H1EP10412 219 aaKnown RBP10.92□□□□□ -0.66
SCFD1-224ENST00000557713 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
SCFD1-224ENST00000557713 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
SCFD1-224ENST00000557713 FAM25EA8MYX2 175 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 CRISP2P16562 243 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 S100A11P31949 105 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
SCFD1-224ENST00000557713 SULT1A1P50225 295 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 PDE6HQ13956 83 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 C2orf50Q96LR7 162 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
SCFD1-224ENST00000557713 IGSF23A1L1A6 192 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 C5orf51A6NDU8 294 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 MPDU1O75352 247 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 NMBP08949 121 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 PYYP10082 97 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 TCL1AP56279 114 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 BAXQ07812 192 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 IL15RAQ13261 267 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
SCFD1-224ENST00000557713 EXOC3-AS1Q8N2X6 119 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 ST6GAL2Q96JF0 529 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 LYRM2Q9NU23 88 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-224ENST00000557713 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 TIMM9Q9Y5J7 89 aa10.9□□□□□ -0.66
SCFD1-224ENST00000557713 UBE2L5PA0A1B0GUS4 154 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 PAX4O43316 350 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 NXPH4O95158 308 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 TCRBP04435 133 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 GPX1P07203 203 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 PVALBP20472 110 aaPredicted RBP10.89□□□□□ -0.67
SCFD1-224ENST00000557713 TMEM252Q8N6L7 170 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 SEC22CQ9BRL7 303 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 ICOSQ9Y6W8 199 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 HERC1Q15751 4861 aa10.89□□□□□ -0.67
SCFD1-224ENST00000557713 TRAV6A0A075B6T7 132 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 LYRM1O43325 122 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 ATP6V1FQ16864 119 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 PRR9Q5T870 116 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 Q6ZQT7 251 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 VGLL1Q99990 258 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
SCFD1-224ENST00000557713 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 FGF7P21781 194 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 FUSP35637 526 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCFD1-224ENST00000557713 CRYBA4P53673 196 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 XGP55808 180 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 HBG1P69891 147 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 HBG2P69892 147 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 SLAQ13239 276 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 RAB32Q13637 225 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 FHL2Q14192 279 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 ICAM4Q14773 271 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 SLC25A2Q9BXI2 301 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 MRPL16Q9NX20 251 aaKnown RBP10.87□□□□□ -0.67
SCFD1-224ENST00000557713 HHLA3Q9XRX5 114 aa10.87□□□□□ -0.67
SCFD1-224ENST00000557713 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-224ENST00000557713 RGS13O14921 159 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-224ENST00000557713 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 ERVFC1-1P60608 527 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 S100A10P60903 97 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 STX12Q86Y82 276 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 NPCDR1Q9BY65 106 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 ZNF492Q9P255 531 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 FAT1Q14517 4588 aa10.86□□□□□ -0.67
SCFD1-224ENST00000557713 EREGO14944 169 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 PRAF2O60831 178 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 NBEAP1P0C6P0 100 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
SCFD1-224ENST00000557713 CDPF1Q6NVV7 123 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 FAM122CQ6P4D5 195 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 NUDT15Q9NV35 164 aa10.85□□□□□ -0.67
SCFD1-224ENST00000557713 MIR17HGQ75NE6 70 aa10.84□□□□□ -0.67
SCFD1-224ENST00000557713 NFE4Q86UQ8 179 aa10.84□□□□□ -0.67
SCFD1-224ENST00000557713 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
SCFD1-224ENST00000557713 GPN1Q9HCN4 374 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-224ENST00000557713 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 H2AFB2P0C5Z0 115 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 ZNF138P52744 262 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 NHLH2Q02577 135 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms