RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 IGKCP01834 107 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 ZNF562Q6V9R5 426 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 IGFBPL1Q8WX77 278 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 SMPXQ9UHP9 88 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 SMAD5-AS1Q9Y6J3 95 aa9.19□□□□□ -0.94
VIPAS39-211ENST00000557658 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 IGHG4P01861 327 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 HLA-DMBP28068 263 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 IGFL4Q6B9Z1 124 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 ZNF575Q86XF7 245 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 ZZEF1O43149 2961 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 ATP5LO75964 103 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 EVI2AP22794 236 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 FXYD2P54710 66 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 TMEM238C9JI98 176 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 DPM2O94777 84 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 CTSGP08311 255 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 FOXC2Q99958 501 aa9.18□□□□□ -0.94
VIPAS39-211ENST00000557658 ZNF672Q499Z4 452 aaPredicted RBP9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 Q8N8P6 123 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 TMEM158Q8WZ71 300 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 APC2O95996 2303 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 NCBP2LA6PVI3 153 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 HLA-DRB4P13762 266 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 NDPQ00604 133 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 KLRD1Q13241 179 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 GTSCR1Q86UQ5 136 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 TTTY13Q9BZ97 58 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 HLA-DRB4X5D2U9 266 aa9.17□□□□□ -0.94
VIPAS39-211ENST00000557658 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 ERCC8Q13216 396 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 KALRNO60229 2985 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 ODF3BA8MYP8 253 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 M0R1W7 72 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
VIPAS39-211ENST00000557658 ARHGAP32A7KAX9 2087 aa9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 Q8NA96 180 aa9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 TM2D2Q9BX73 214 aa9.15□□□□□ -0.94
VIPAS39-211ENST00000557658 TMEM8BA6NDV4 472 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 PRAC2D3DTV9 90 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 PRTN3P24158 256 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 RAB9AP51151 201 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 SRSF1Q07955 248 aaKnown RBP eCLIP9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 CEND1Q8N111 149 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 ACACAQ13085 2346 aa9.15□□□□□ -0.95
VIPAS39-211ENST00000557658 DMXL2Q8TDJ6 3036 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 K7ERJ3 54 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 IL17RELQ6ZVW7 336 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 MYOZ3Q8TDC0 251 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 PHLDA1Q8WV24 401 aaPredicted RBP9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 TMEM160Q9NX00 188 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 TIMD4Q96H15 378 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
VIPAS39-211ENST00000557658 IGHV3-35A0A0C4DH35 117 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 LAGE3Q14657 143 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 LINC01560Q8TB33 94 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 TRAV40A0A0B4J280 105 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 IGKV3D-20A0A0C4DH25 116 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 TAL2Q16559 108 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 RNF182Q8N6D2 247 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 Q8N6K4 173 aa9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 MRPL35Q9NZE8 188 aaKnown RBP9.13□□□□□ -0.95
VIPAS39-211ENST00000557658 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 TEX48A0A1B0GUV7 120 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 PRSS47A8MTI9 375 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 OOSP1A8MZH6 123 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 TMEM11P17152 192 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 E9PLD3 99 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 BUB3O43684 328 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 TRGV3P03979 118 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 VMO1Q7Z5L0 202 aa9.12□□□□□ -0.95
VIPAS39-211ENST00000557658 ANKRD11Q6UB99 2663 aaPredicted RBP9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 A0A087WX48 190 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 IGHV7-81A0A0B4J1V7 117 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 GOSR1O95249 250 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 EBI3Q14213 229 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 NRACQ8N912 160 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 AGPAT4-IT1Q9H0P7 198 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 IGLL5B9A064 214 aa9.11□□□□□ -0.95
VIPAS39-211ENST00000557658 LY6HO94772 140 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms