RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FAM167A-AS1Q96KT0 104 aa6.03□□□□□ -1.44
PSEN1-223ENST00000557511 ARPC5LQ9BPX5 153 aa6.03□□□□□ -1.44
PSEN1-223ENST00000557511 C20orf144Q9BQM9 153 aa6.03□□□□□ -1.44
PSEN1-223ENST00000557511 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
PSEN1-223ENST00000557511 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
PSEN1-223ENST00000557511 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 A0A0D9SG52 128 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 RNF222A6NCQ9 220 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 H7BYZ3 331 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 J3KRW8 73 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 K7EQM0 130 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 M0R3E3 92 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 HTN1P15515 57 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 TAS2R60P59551 318 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
PSEN1-223ENST00000557511 BAP18Q8IXM2 172 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 STOML3Q8TAV4 291 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 FXYD5Q96DB9 178 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 HYLS1Q96M11 299 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 ODF3Q96PU9 254 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 Q9H3A6 140 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 TMEM167BQ9NRX6 74 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 NBEAL2Q6ZNJ1 2754 aa6.02□□□□□ -1.45
PSEN1-223ENST00000557511 TRAV10A0A0B4J240 114 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 PGPA6NDG6 321 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 HMSDA8MTL9 139 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 PRAC2D3DTV9 90 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 SMLR1H3BR10 107 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 HMGB3O15347 200 aaKnown RBP6.01□□□□□ -1.45
PSEN1-223ENST00000557511 NDUFB4O95168 129 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 CXorf1O96002 111 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 SLC25A5P05141 298 aaKnown RBP6.01□□□□□ -1.45
PSEN1-223ENST00000557511 GPX1P07203 203 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 RBMY1A1P0DJD3 496 aaKnown RBP6.01□□□□□ -1.45
PSEN1-223ENST00000557511 RBMY1CP0DJD4 496 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF345Q14585 488 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 RBMY1FQ15415 496 aaKnown RBP6.01□□□□□ -1.45
PSEN1-223ENST00000557511 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 KCNRGQ8N5I3 272 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 C2CD4CQ8TF44 421 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 PHYHIPLQ96FC7 376 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF471Q9BX82 626 aaPredicted RBP6.01□□□□□ -1.45
PSEN1-223ENST00000557511 SH3BGRL3Q9H299 93 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 OTORQ9NRC9 128 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 RPH3ALQ9UNE2 315 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 TENM3Q9P273 2699 aa6.01□□□□□ -1.45
PSEN1-223ENST00000557511 RBAKDNA6NC62 111 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF705GA8MUZ8 300 aaPredicted RBP6□□□□□ -1.45
PSEN1-223ENST00000557511 SNURFLB1AK76 121 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 STAG3L2P0CL84 134 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 STAG3L3P0CL85 134 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 ARL14EPLP0DKL9 152 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 CT45A10P0DMU9 189 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 PRB4P10163 310 aaPredicted RBP6□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF138P52744 262 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 TCTAP57738 103 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 DAD1P61803 113 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 ERCC8Q13216 396 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF493Q6ZR52 646 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 C9orf47Q6ZRZ4 202 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 RAB24Q969Q5 203 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 C16orf74Q96GX8 76 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 NDFIP1Q9BT67 221 aa6□□□□□ -1.45
PSEN1-223ENST00000557511 YTHDF2Q9Y5A9 579 aaKnown RBP6□□□□□ -1.45
PSEN1-223ENST00000557511 IGKV2-40A0A087WW87 121 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-223ENST00000557511 TRAV12-3A0A0B4J271 114 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 CTXND1A0A1B0GTU2 59 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 C7orf71A4D174 169 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 IGLL5B9A064 214 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-223ENST00000557511 BCL2L11O43521 198 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 IGKV2D-40P01614 121 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-223ENST00000557511 NMBP08949 121 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 GCHFRP30047 84 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 RNASE4P34096 147 aaKnown RBP5.99□□□□□ -1.45
PSEN1-223ENST00000557511 FAM222AQ5U5X8 452 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 GFI1BQ5VTD9 330 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 EIF5AL1Q6IS14 154 aaKnown RBP5.99□□□□□ -1.45
PSEN1-223ENST00000557511 AKAP14Q86UN6 197 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 ARL6IP6Q8N6S5 226 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 PYGO2Q9BRQ0 406 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 AGPAT4-IT1Q9H0P7 198 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
PSEN1-223ENST00000557511 AGRNO00468 2067 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 TRBV7-9A0A0J9YWB2 115 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 LCE6AA0A183 80 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 CBY3A6NI87 242 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 UMAD1C9J7I0 102 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 DIRC3C9JPN6 131 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 EIF3GO75821 320 aaKnown RBP eCLIP5.98□□□□□ -1.45
PSEN1-223ENST00000557511 IFNA7P01567 189 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 SEC11BP0C7V7 166 aa5.98□□□□□ -1.45
PSEN1-223ENST00000557511 TPT1P13693 172 aaKnown RBP5.98□□□□□ -1.45
PSEN1-223ENST00000557511 Q6ZNX1 250 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms