RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 RBMY1CP0DJD4 496 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 CDKN1BP46527 198 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 RAB5CP51148 216 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 UBE2G2P60604 165 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 RBMY1FQ15415 496 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 A0A0J9YWU9 116 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 A0A1W2PRE2 83 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 RBAKDNA6NC62 111 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 H2AFB1P0C5Y9 115 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 LEPP41159 167 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 SUMO1P63165 101 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 TMEM78Q5T7P6 136 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 Q8NAQ8 132 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 Q8TAT8 98 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 GOLT1BQ9Y3E0 138 aa10.75□□□□□ -0.69
VIPAS39-210ENST00000557466 STAB2Q8WWQ8 2551 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 NBEAL2Q6ZNJ1 2754 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 J3KRW8 73 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 TSPOP30536 169 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
VIPAS39-210ENST00000557466 DEFB4AO15263 64 aa10.73□□□□□ -0.69
VIPAS39-210ENST00000557466 TCRAP04437 139 aa10.73□□□□□ -0.69
VIPAS39-210ENST00000557466 MIFP14174 115 aa10.73□□□□□ -0.69
VIPAS39-210ENST00000557466 ZNF138P52744 262 aa10.73□□□□□ -0.69
VIPAS39-210ENST00000557466 C11orf68Q9H3H3 251 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-210ENST00000557466 TRAV8-1A0A0A6YYK1 113 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 KLLNB2CW77 178 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 CRISP2P16562 243 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 PRR9Q5T870 116 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 NEU1Q99519 415 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
VIPAS39-210ENST00000557466 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 PAGE4O60829 102 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 ATP5G3P48201 142 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 BTN1A1Q13410 526 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 ARL2-SNX15V9GYD0 113 aa10.71□□□□□ -0.69
VIPAS39-210ENST00000557466 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 C7orf71A4D174 169 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 SMIM9A6NGZ8 99 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 IFNA7P01567 189 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 HBE1P02100 147 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 CCL20P78556 96 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 CST9LP1Q5W188 147 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 SGK494Q96LW2 274 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 NKX6-2Q9C056 277 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-210ENST00000557466 ZNF705GA8MUZ8 300 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 PEX7O00628 323 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 IGLV2-11P01706 119 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 PRM2P04554 102 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 GPX1P07203 203 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 NMBP08949 121 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 CCDC28AQ8IWP9 274 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 TVP23CQ96ET8 276 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 LINC01587Q99440 93 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
VIPAS39-210ENST00000557466 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 H7BYZ3 331 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 K7EQM0 130 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 PPT1P50897 306 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 MUC7Q8TAX7 377 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 GNG13Q9P2W3 67 aa10.68□□□□□ -0.7
VIPAS39-210ENST00000557466 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 F6UZH7 168 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 TAS2R60P59551 318 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 FLI1Q01543 452 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 Q6ZQT7 251 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 HIST1H2BAQ96A08 127 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 LINC00479Q96M42 142 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 NIPSNAP3BQ9BS92 247 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 MANBALQ9NQG1 85 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 CELA1Q9UNI1 258 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 PSG8Q9UQ74 426 aa10.67□□□□□ -0.7
VIPAS39-210ENST00000557466 ZNF324O75467 553 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-210ENST00000557466 AZU1P20160 251 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms