RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SETXQ7Z333 2677 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 TMEM144Q7Z5S9 345 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 PDZD9Q8IXQ8 264 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 LFNGQ8NES3 379 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR10P1Q8NGE3 313 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR5C1Q8NGR4 320 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR1P1Q8NH06 330 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 LEAP2Q969E1 77 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR4C12Q96R67 309 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 FOXC2Q99958 501 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 ZNF471Q9BX82 626 aaPredicted RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 SETD2Q9BYW2 2564 aaPredicted RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 COMMD5Q9GZQ3 224 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 WDR61Q9GZS3 305 aaKnown RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 ZNF430Q9H8G1 570 aaPredicted RBP2.04□□□□□ -2.08
VRK1-207ENST00000557352 ENY2Q9NPA8 101 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 PARP11Q9NR21 331 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 UQCC1Q9NVA1 299 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 PSENENQ9NZ42 101 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 NUP50Q9UKX7 468 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 OR51B2Q9Y5P1 312 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 ARL2-SNX15V9GYD0 113 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 ZFHX3Q15911 3703 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 HIVEP1P15822 2718 aa2.04□□□□□ -2.08
VRK1-207ENST00000557352 TRAV3A0A0B4J244 114 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CENPVL3A0A0U1RRI6 287 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 TEX50A0A1B0GTY4 177 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 A0A1W2PRD5 423 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 A0A1W2PRF3 423 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 A0A1W2PRM7 423 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 FAM24AA6NFZ4 105 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CEBPZOSA8MTT3 80 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 SEC14L6B5MCN3 397 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 C11orf94C9JXX5 98 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 C17orf112F2Z3M2 114 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 TEX46H3BTG2 121 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 H3BUA1 57 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CYB5BO43169 146 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CST7O76096 145 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 IFNA5P01569 189 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 IFNA17P01571 189 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1D-33P01593 117 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1-33P01594 117 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 IGHV3-7P01780 117 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 HBE1P02100 147 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 FBP1P09467 338 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 METTL15P1P0C7V9 234 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 RNASE2P10153 161 aaKnown RBP2.03□□□□□ -2.08
VRK1-207ENST00000557352 IAPPP10997 89 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CTRB1P17538 263 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 ATP6V0CP27449 155 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 OPRK1P41145 380 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 RPL27AP46776 148 aaKnown RBP2.03□□□□□ -2.08
VRK1-207ENST00000557352 REG1BP48304 166 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 PLP1P60201 277 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 WT1-ASQ06250 92 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 RAB31Q13636 194 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 DIAPH2-AS1Q14236 149 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 KIAA0087Q14695 138 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 SPANXN5Q5MJ07 72 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 Q5W150 140 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 CTRB2Q6GPI1 263 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 ALKAL2Q6UX46 152 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 TTC9CQ8N5M4 171 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 TMEM86BQ8N661 226 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 ARL6IP6Q8N6S5 226 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 SUN5Q8TC36 379 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 MBD3L1Q8WWY6 194 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 RBMXL1Q96E39 390 aaKnown RBP2.03□□□□□ -2.08
VRK1-207ENST00000557352 P2RX4Q99571 388 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 TXNDC17Q9BRA2 123 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 NPCDR1Q9BY65 106 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 REG4Q9BYZ8 158 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 GPR61Q9BZJ8 451 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 WFDC1Q9HC57 220 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 NPVFQ9HCQ7 196 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 ZC4H2Q9NQZ6 224 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 SIRT7Q9NRC8 400 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 PITPNC1Q9UKF7 332 aa2.03□□□□□ -2.08
VRK1-207ENST00000557352 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
VRK1-207ENST00000557352 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 TRAV40A0A0B4J280 105 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 CTXND1A0A1B0GTU2 59 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 UBE2L5PA0A1B0GUS4 154 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 KRBOX1C9JBD0 128 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 H3BP45 60 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 PEX7O00628 323 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 CA2P00918 260 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 IFNA10P01566 189 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 IGHG2P01859 326 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 IFNA4P05014 189 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 HIST1H1BP16401 226 aaKnown RBP2.02□□□□□ -2.09
VRK1-207ENST00000557352 M6PRP20645 277 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 SNCAP37840 140 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 RAB2AP61019 212 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 TMEM267Q0VDI3 215 aaPredicted RBP2.02□□□□□ -2.09
VRK1-207ENST00000557352 KLRD1Q13241 179 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 CLINT1Q14677 625 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms