RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 PHYHIPLQ96FC7 376 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 ODF3Q96PU9 254 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 VGLL1Q99990 258 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 GSN-AS1Q9NRJ2 163 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 NDUFA13Q9P0J0 144 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 TMEM14CQ9P0S9 112 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 C7orf71A4D174 169 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 ZNF253O75346 499 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-227ENST00000557307 UPK1BO75841 260 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 OR10J4P0C629 311 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 HIST1H1EP10412 219 aaKnown RBP7.55□□□□□ -1.2
SYNE2-227ENST00000557307 H2BFSP57053 126 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 RAB31Q13636 194 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 ICAM4Q14773 271 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 GUK1Q16774 197 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 ESRGQ1W209 222 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 FAM122CQ6P4D5 195 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 Q8TAT8 98 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 VSIG2Q96IQ7 327 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 KLF12Q9Y4X4 402 aa7.55□□□□□ -1.2
SYNE2-227ENST00000557307 SNURFLB1AK76 121 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 RLN2P04090 185 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 FAM3BP58499 235 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-227ENST00000557307 HBG1P69891 147 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 HBG2P69892 147 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 RXFP4Q8TDU9 374 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 FXYD5Q96DB9 178 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 GNPNAT1Q96EK6 184 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-227ENST00000557307 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
SYNE2-227ENST00000557307 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
SYNE2-227ENST00000557307 RNF24Q9Y225 148 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
SYNE2-227ENST00000557307 A6NHS1 94 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 SLC25A5P05141 298 aaKnown RBP7.53□□□□□ -1.2
SYNE2-227ENST00000557307 CRISP2P16562 243 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 M6PRP20645 277 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
SYNE2-227ENST00000557307 CCL18P55774 89 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 NMES1Q9C002 83 aa7.53□□□□□ -1.2
SYNE2-227ENST00000557307 MRPL16Q9NX20 251 aaKnown RBP7.53□□□□□ -1.2
SYNE2-227ENST00000557307 A0A096LPF7 62 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 E5RGE8 158 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 INMT-MINDY4F8WBC2 141 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 MPDU1O75352 247 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 DAZ2Q13117 558 aaKnown RBP7.52□□□□□ -1.21
SYNE2-227ENST00000557307 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 S100ZQ8WXG8 99 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 SMIM3Q9BZL3 60 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 OR51M1Q9H341 326 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 Q9H8V8 135 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 WFDC1Q9HC57 220 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 ZNF492Q9P255 531 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 FUT9Q9Y231 359 aa7.52□□□□□ -1.21
SYNE2-227ENST00000557307 SPINK4O60575 86 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 NBEAP1P0C6P0 100 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 TCL1AP56279 114 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 PDE6HQ13956 83 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 LINC00299Q6ZSB3 139 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 EIF4E3Q8N5X7 224 aaKnown RBP7.51□□□□□ -1.21
SYNE2-227ENST00000557307 PPP1R1CQ8WVI7 109 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 PAXXQ9BUH6 204 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 PRELID1Q9Y255 219 aa7.51□□□□□ -1.21
SYNE2-227ENST00000557307 GPX1P07203 203 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
SYNE2-227ENST00000557307 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 ANXA2RQ3ZCQ2 193 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 MUC21Q5SSG8 566 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 LINC00477Q96M19 166 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 UPK3BQ9BT76 320 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 Q9H3A6 140 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 AAMDCQ9H7C9 122 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 MRPS16Q9Y3D3 137 aaKnown RBP7.5□□□□□ -1.21
SYNE2-227ENST00000557307 HSPB11Q9Y547 144 aa7.5□□□□□ -1.21
SYNE2-227ENST00000557307 TRGV2A0A075B6R0 118 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 IGHV1OR15-1A0A075B7D0 117 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 C16orf90A8MZG2 172 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 OR7C2O60412 319 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 MPC2O95563 127 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 RANP62826 216 aaKnown RBP7.49□□□□□ -1.21
SYNE2-227ENST00000557307 FFAR4Q5NUL3 377 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 ATP5SQ99766 215 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 MARVELD1Q9BSK0 173 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 MRPL32Q9BYC8 188 aaKnown RBP7.49□□□□□ -1.21
SYNE2-227ENST00000557307 SLC25A31Q9H0C2 315 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 PTTG2Q9NZH5 202 aa7.49□□□□□ -1.21
SYNE2-227ENST00000557307 MBD2Q9UBB5 411 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms