RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RAB1BQ9H0U4 201 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 GATA1P15976 413 aaPredicted RBP8.87□□□□□ -0.99
SRP54-213ENST00000556994 HSD52Q0P140 79 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 C5orf64Q2M2E5 130 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
SRP54-213ENST00000556994 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 C21orf62Q9NYP8 219 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 GRNP28799 593 aaKnown RBP8.86□□□□□ -0.99
SRP54-213ENST00000556994 LEPP41159 167 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 RNF185Q96GF1 192 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 NDUFA3O95167 84 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 NPBQ8NG41 125 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 OR2K2Q8NGT1 345 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 ARPC1AQ92747 370 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
SRP54-213ENST00000556994 TLN1Q9Y490 2541 aaKnown RBP8.86□□□□□ -0.99
SRP54-213ENST00000556994 NBASA2RRP1 2371 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 PRAC2D3DTV9 90 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 RPL7P18124 248 aaKnown RBP8.85□□□□□ -0.99
SRP54-213ENST00000556994 DYNAPQ8N1N2 210 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 ANKHD1Q8IWZ3 2542 aaKnown RBP8.85□□□□□ -0.99
SRP54-213ENST00000556994 K7EMI3 77 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 K7EP34 96 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 PRSS1P07477 247 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 CTSGP08311 255 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 BMI1P35226 326 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
SRP54-213ENST00000556994 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 GCSHP23434 173 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 LY6G5BQ8NDX9 201 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 MAP1LC3AQ9H492 121 aa8.84□□□□□ -0.99
SRP54-213ENST00000556994 HRNRQ86YZ3 2850 aaPredicted RBP8.84□□□□□ -0.99
SRP54-213ENST00000556994 FAM90A27PA6NNH2 459 aa8.83□□□□□ -1
SRP54-213ENST00000556994 SIVA1O15304 175 aa8.83□□□□□ -1
SRP54-213ENST00000556994 TNFRSF6BO95407 300 aa8.83□□□□□ -1
SRP54-213ENST00000556994 ZNF562Q6V9R5 426 aa8.83□□□□□ -1
SRP54-213ENST00000556994 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
SRP54-213ENST00000556994 OR11H6Q8NGC7 330 aa8.83□□□□□ -1
SRP54-213ENST00000556994 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
SRP54-213ENST00000556994 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
SRP54-213ENST00000556994 A0A1W2PPM0 123 aa8.83□□□□□ -1
SRP54-213ENST00000556994 FXYD2P54710 66 aa8.83□□□□□ -1
SRP54-213ENST00000556994 ODF1Q14990 250 aa8.83□□□□□ -1
SRP54-213ENST00000556994 GTSCR1Q86UQ5 136 aa8.83□□□□□ -1
SRP54-213ENST00000556994 TTC9CQ8N5M4 171 aa8.83□□□□□ -1
SRP54-213ENST00000556994 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
SRP54-213ENST00000556994 HHLA3Q9XRX5 114 aa8.83□□□□□ -1
SRP54-213ENST00000556994 FABP5P3A8MUU1 101 aa8.82□□□□□ -1
SRP54-213ENST00000556994 K7ERJ3 54 aa8.82□□□□□ -1
SRP54-213ENST00000556994 CEACAM3P40198 252 aa8.82□□□□□ -1
SRP54-213ENST00000556994 IL17RELQ6ZVW7 336 aa8.82□□□□□ -1
SRP54-213ENST00000556994 TMEM158Q8WZ71 300 aa8.82□□□□□ -1
SRP54-213ENST00000556994 FOXC2Q99958 501 aa8.82□□□□□ -1
SRP54-213ENST00000556994 FCER1GP30273 86 aa8.82□□□□□ -1
SRP54-213ENST00000556994 PSMG3-AS1Q96PY0 264 aa8.82□□□□□ -1
SRP54-213ENST00000556994 CEP295Q9C0D2 2601 aa8.82□□□□□ -1
SRP54-213ENST00000556994 SPTA1P02549 2419 aa8.81□□□□□ -1
SRP54-213ENST00000556994 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
SRP54-213ENST00000556994 G3V4G9 280 aa8.81□□□□□ -1
SRP54-213ENST00000556994 TRGV3P03979 118 aa8.81□□□□□ -1
SRP54-213ENST00000556994 Q6ZQT7 251 aa8.81□□□□□ -1
SRP54-213ENST00000556994 DTX2Q86UW9 622 aa8.81□□□□□ -1
SRP54-213ENST00000556994 PTPRZ1P23471 2315 aaPredicted RBP8.81□□□□□ -1
SRP54-213ENST00000556994 IGHV3-49A0A0A0MS15 119 aa8.81□□□□□ -1
SRP54-213ENST00000556994 FBLL1A6NHQ2 334 aaKnown RBP8.81□□□□□ -1
SRP54-213ENST00000556994 SMIM13P0DJ93 91 aa8.81□□□□□ -1
SRP54-213ENST00000556994 SAMD5Q5TGI4 173 aa8.81□□□□□ -1
SRP54-213ENST00000556994 ZNF48Q96MX3 618 aaPredicted RBP8.81□□□□□ -1
SRP54-213ENST00000556994 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
SRP54-213ENST00000556994 TMEM8BA6NDV4 472 aa8.8□□□□□ -1
SRP54-213ENST00000556994 ODF3BA8MYP8 253 aa8.8□□□□□ -1
SRP54-213ENST00000556994 IGKCP01834 107 aa8.8□□□□□ -1
SRP54-213ENST00000556994 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
SRP54-213ENST00000556994 TMEM160Q9NX00 188 aa8.8□□□□□ -1
SRP54-213ENST00000556994 TRAV40A0A0B4J280 105 aa8.8□□□□□ -1
SRP54-213ENST00000556994 IGKV3D-20A0A0C4DH25 116 aa8.8□□□□□ -1
SRP54-213ENST00000556994 FABP2P12104 132 aa8.8□□□□□ -1
SRP54-213ENST00000556994 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
SRP54-213ENST00000556994 CHAC1Q9BUX1 264 aa8.8□□□□□ -1
SRP54-213ENST00000556994 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
SRP54-213ENST00000556994 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
SRP54-213ENST00000556994 IGHV7-81A0A0B4J1V7 117 aa8.79□□□□□ -1
SRP54-213ENST00000556994 ZNF207O43670 478 aaKnown RBP8.79□□□□□ -1
SRP54-213ENST00000556994 CLEC3BP05452 202 aa8.79□□□□□ -1
SRP54-213ENST00000556994 TMEM11P17152 192 aa8.79□□□□□ -1
SRP54-213ENST00000556994 PRTN3P24158 256 aa8.79□□□□□ -1
SRP54-213ENST00000556994 ECSCRQ19T08 205 aa8.79□□□□□ -1
SRP54-213ENST00000556994 NEGR1Q7Z3B1 354 aa8.79□□□□□ -1
SRP54-213ENST00000556994 CNFNQ9BYD5 112 aa8.79□□□□□ -1
SRP54-213ENST00000556994 ZMAT4Q9H898 229 aa8.79□□□□□ -1
SRP54-213ENST00000556994 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms