RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 C16orf74Q96GX8 76 aa16.03■□□□□ 0.16
PABPN1-207ENST00000556821 TRAV12-3A0A0B4J271 114 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 RNF222A6NCQ9 220 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 KLLNB2CW77 178 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 M6PRP20645 277 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 ZNF266Q14584 549 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 ACOT6Q3I5F7 207 aaPredicted RBP16.02■□□□□ 0.16
PABPN1-207ENST00000556821 LINC00477Q96M19 166 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 VGLL1Q99990 258 aa16.02■□□□□ 0.16
PABPN1-207ENST00000556821 VPS13DQ5THJ4 4388 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 HTN3P15516 51 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 TAS2R45P59539 299 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 RANP62826 216 aaKnown RBP16.01■□□□□ 0.15
PABPN1-207ENST00000556821 ZNF493Q6ZR52 646 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 HSD17B11Q8NBQ5 300 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 NDUFAF3Q9BU61 184 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 Q9H3A6 140 aa16.01■□□□□ 0.15
PABPN1-207ENST00000556821 SLC25A5P05141 298 aaKnown RBP16■□□□□ 0.15
PABPN1-207ENST00000556821 CRISP2P16562 243 aa16■□□□□ 0.15
PABPN1-207ENST00000556821 OR2G3Q8NGZ4 309 aa16■□□□□ 0.15
PABPN1-207ENST00000556821 C7orf71A4D174 169 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 DEFB130BP0DP73 79 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 DEFB130AP0DP74 79 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 ATP6V0CP27449 155 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 CD300CQ08708 224 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 BTN1A1Q13410 526 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 PRR9Q5T870 116 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 LYPD1Q8N2G4 141 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 ZFAND2AQ8N6M9 145 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 OR2T35Q8NGX2 323 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 PSMG3Q9BT73 122 aaPredicted RBP15.99■□□□□ 0.15
PABPN1-207ENST00000556821 TNFSF18Q9UNG2 199 aa15.99■□□□□ 0.15
PABPN1-207ENST00000556821 FXYD6-FXYD2A0A087WZ82 144 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 OR10G4Q8NGN3 311 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 OR10G9Q8NGN4 311 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 OR10G7Q8NGN6 311 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 FAM210BQ96KR6 192 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 ZNF492Q9P255 531 aa15.98■□□□□ 0.15
PABPN1-207ENST00000556821 TIMM8BQ9Y5J9 83 aaPredicted RBP15.98■□□□□ 0.15
PABPN1-207ENST00000556821 HMGB3O15347 200 aaKnown RBP15.97■□□□□ 0.15
PABPN1-207ENST00000556821 TMEM78Q5T7P6 136 aa15.97■□□□□ 0.15
PABPN1-207ENST00000556821 PQLC2Q6ZP29 291 aa15.97■□□□□ 0.15
PABPN1-207ENST00000556821 Q8TAT8 98 aa15.97■□□□□ 0.15
PABPN1-207ENST00000556821 PYGO2Q9BRQ0 406 aa15.97■□□□□ 0.15
PABPN1-207ENST00000556821 SH3BGRL3Q9H299 93 aa15.97■□□□□ 0.15
PABPN1-207ENST00000556821 NOP10Q9NPE3 64 aaKnown RBP15.97■□□□□ 0.15
PABPN1-207ENST00000556821 A0A1W2PPV4 95 aa15.96■□□□□ 0.15
PABPN1-207ENST00000556821 ZNF324O75467 553 aaPredicted RBP15.96■□□□□ 0.15
PABPN1-207ENST00000556821 TMEM88Q6PEY1 159 aa15.96■□□□□ 0.15
PABPN1-207ENST00000556821 INO80EQ8NBZ0 244 aaPredicted RBP15.96■□□□□ 0.15
PABPN1-207ENST00000556821 RBAKDNA6NC62 111 aa15.95■□□□□ 0.14
PABPN1-207ENST00000556821 NMBP08949 121 aa15.95■□□□□ 0.14
PABPN1-207ENST00000556821 CDC34P49427 236 aaPredicted RBP15.95■□□□□ 0.14
PABPN1-207ENST00000556821 RPL7L1Q6DKI1 246 aaKnown RBP15.95■□□□□ 0.14
PABPN1-207ENST00000556821 LINC00612Q8N6U2 182 aa15.95■□□□□ 0.14
PABPN1-207ENST00000556821 MUC4Q99102 2169 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 DIRC3C9JPN6 131 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 GPX1P07203 203 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 ARL14EPLP0DKL9 152 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 RNASE4P34096 147 aaKnown RBP15.94■□□□□ 0.14
PABPN1-207ENST00000556821 CSN1S1P47710 185 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 ZNF138P52744 262 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 Q6ZQT7 251 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 CCDC28AQ8IWP9 274 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 OTORQ9NRC9 128 aa15.94■□□□□ 0.14
PABPN1-207ENST00000556821 STAG3L2P0CL84 134 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 STAG3L3P0CL85 134 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 P0DMU3 169 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 FAM231AP0DMU4 169 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 FAM231CP0DMU5 169 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 C11orf72Q8NBR9 251 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 RAB24Q969Q5 203 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 LINC00467Q9BRT7 94 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 DNAH6Q9C0G6 4158 aa15.93■□□□□ 0.14
PABPN1-207ENST00000556821 DYNC1H1Q14204 4646 aaKnown RBP15.92■□□□□ 0.14
PABPN1-207ENST00000556821 TRBV7-9A0A0J9YWB2 115 aa15.92■□□□□ 0.14
PABPN1-207ENST00000556821 CBY3A6NI87 242 aa15.92■□□□□ 0.14
PABPN1-207ENST00000556821 ATP5G1P05496 136 aa15.92■□□□□ 0.14
PABPN1-207ENST00000556821 ATP5G3P48201 142 aa15.92■□□□□ 0.14
PABPN1-207ENST00000556821 SERF2P84101 59 aa15.92■□□□□ 0.14
PABPN1-207ENST00000556821 PGPA6NDG6 321 aa15.91■□□□□ 0.14
PABPN1-207ENST00000556821 POM121L12Q8N7R1 296 aa15.91■□□□□ 0.14
PABPN1-207ENST00000556821 RXFP4Q8TDU9 374 aa15.91■□□□□ 0.14
PABPN1-207ENST00000556821 HYLS1Q96M11 299 aa15.91■□□□□ 0.14
PABPN1-207ENST00000556821 SNURFLB1AK76 121 aa15.9■□□□□ 0.14
PABPN1-207ENST00000556821 SMLR1H3BR10 107 aa15.9■□□□□ 0.14
PABPN1-207ENST00000556821 ARPC5O15511 151 aa15.9■□□□□ 0.14
PABPN1-207ENST00000556821 SSX7Q7RTT5 188 aa15.9■□□□□ 0.14
PABPN1-207ENST00000556821 EIF4E3Q8N5X7 224 aaKnown RBP15.9■□□□□ 0.14
PABPN1-207ENST00000556821 BORCS7-ASMTA0A0B4J1R7 106 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 F5H768 121 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 ANXA2RQ3ZCQ2 193 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 SUN5Q8TC36 379 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 GNPNAT1Q96EK6 184 aaPredicted RBP15.89■□□□□ 0.13
PABPN1-207ENST00000556821 GSN-AS1Q9NRJ2 163 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 RPH3ALQ9UNE2 315 aa15.89■□□□□ 0.13
PABPN1-207ENST00000556821 MBP02144 154 aa15.88■□□□□ 0.13
PABPN1-207ENST00000556821 GCHFRP30047 84 aa15.88■□□□□ 0.13
PABPN1-207ENST00000556821 DAZ2Q13117 558 aaKnown RBP15.88■□□□□ 0.13
PABPN1-207ENST00000556821 ZNF680Q8NEM1 530 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms