RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CCL17Q92583 94 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 SPTSSAQ969W0 71 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 PGLYRP4Q96LB8 373 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 SLC50A1Q9BRV3 221 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 NINQ8N4C6 2090 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1BA6NDE4 496 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1EA6NEQ0 496 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 LOC730098B7Z3J9 87 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 C16orf97H3BN30 126 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 ZNF73O43830 326 aaPredicted RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1DP0C7P1 496 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1A1P0DJD3 496 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1CP0DJD4 496 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 RPL34P49207 117 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 FHL2Q14192 279 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 RBMY1FQ15415 496 aaKnown RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 SLC48A1Q6P1K1 146 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 ZNF329Q86UD4 541 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 MKXQ8IYA7 352 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 Q8N2B8 174 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 C6orf223Q8N319 242 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 Q8N8P6 123 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 DAND5Q8N907 189 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 BBC3Q96PG8 261 aaPredicted RBP4.7□□□□□ -1.66
TDP1-215ENST00000556498 GFRA4Q9GZZ7 299 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 Q9H3A6 140 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 CTSZQ9UBR2 303 aa4.7□□□□□ -1.66
TDP1-215ENST00000556498 A0A0A6YYD4 124 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.69□□□□□ -1.66
TDP1-215ENST00000556498 ZNF883P0CG24 379 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 LMO2P25791 158 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
TDP1-215ENST00000556498 CACNG7P62955 275 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 PIK3CD-AS1Q5SR53 167 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 C2orf82Q6UX34 121 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 ZNF497Q6ZNH5 498 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 LINC00173Q6ZV60 143 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 LINC00596Q86U02 117 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 C6orf106Q9H6K1 298 aaPredicted RBP4.69□□□□□ -1.66
TDP1-215ENST00000556498 SSC5DA1L4H1 1573 aa4.69□□□□□ -1.66
TDP1-215ENST00000556498 HEATR5AQ86XA9 2040 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 ARID2Q68CP9 1835 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 A0A1W2PQD3 144 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 TMEM14DPA8MWL7 114 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 FSHBP01225 129 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 CD70P32970 193 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 RBM3P98179 157 aaKnown RBP4.68□□□□□ -1.66
TDP1-215ENST00000556498 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 ZNF876PQ49A33 203 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 MDP1Q86V88 176 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 LINC01465Q8N7H1 131 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 PRSS3P2Q8NHM4 247 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 DYNLRB2Q8TF09 96 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 SPACA5Q96QH8 159 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 CCL13Q99616 98 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
TDP1-215ENST00000556498 EP400Q96L91 3159 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 FANCMQ8IYD8 2048 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 DOCK6Q96HP0 2047 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 TRBV7-1A0A0A6YYK4 115 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 TRAV13-2A0A0B4J235 113 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 LOC101059948A0A1B0GTJ6 334 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 CPSF4LA6NMK7 179 aaKnown RBP4.67□□□□□ -1.66
TDP1-215ENST00000556498 LTAP01374 205 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 COX6CP09669 75 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 INAFM2P0DMQ5 153 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 IL9P15248 144 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 FCER1GP30273 86 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 XCL1P47992 114 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 MP68P56378 58 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 HOXA4Q00056 320 aaPredicted RBP4.67□□□□□ -1.66
TDP1-215ENST00000556498 C9orf57Q5W0N0 161 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 Q6JHZ5 121 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 LYPD6Q86Y78 171 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 ODF3L1Q8IXM7 274 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 CD177Q8N6Q3 437 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 SLC25A29Q8N8R3 303 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 Q96M85 177 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 LINC00597Q9H2U6 94 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 SLC25A22Q9H936 323 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 ESM1Q9NQ30 184 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 MRPL35Q9NZE8 188 aaKnown RBP4.67□□□□□ -1.66
TDP1-215ENST00000556498 XCL2Q9UBD3 114 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 TAC3Q9UHF0 121 aa4.67□□□□□ -1.66
TDP1-215ENST00000556498 GREB1LQ9C091 1923 aaPredicted RBP4.67□□□□□ -1.66
TDP1-215ENST00000556498 A8MUN3 132 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 M0R381 172 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 LST1O00453 97 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 NXPH4O95158 308 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 PLNP26678 52 aa4.66□□□□□ -1.66
TDP1-215ENST00000556498 SS18Q15532 418 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms