RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 RNASE6Q93091 150 aaKnown RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 VKORC1Q9BQB6 163 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 SAP30LQ9HAJ7 183 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 CTSZQ9UBR2 303 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 RPUSD1Q9UJJ7 312 aaKnown RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 IGKV1-16P04430 117 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 AMY1AP04745 511 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 HSPB1P04792 205 aaKnown RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 ADMP35318 185 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 RPL15P61313 204 aaKnown RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 FOXI1Q12951 378 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 KLF17Q5JT82 389 aaPredicted RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 GTSCR1Q86UQ5 136 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 NPCDR1Q9BY65 106 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 SIGLEC8Q9NYZ4 499 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 TIMM9Q9Y5J7 89 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 LINC00312Q9Y6C7 94 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 ARHGAP32A7KAX9 2087 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 RRHO14718 337 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 NDUFB4O95168 129 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 CCL3L1P16619 93 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 INSL3P51460 131 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 FAM90A2PQ658T7 463 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM200BQ69YZ2 307 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 LYPD2Q6UXB3 125 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 S1PR3Q99500 378 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 SRRM4A7MD48 611 aaKnown RBP4.05□□□□□ -1.76
TMEM260-210ENST00000556422 CEBPZOSA8MTT3 80 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 PLAUP00749 431 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 TRACP01848 142 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 C3orf79P0CE67 100 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 MYOD1P15172 320 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 CDIP1Q9H305 208 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM14BQ9NUH8 114 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
TMEM260-210ENST00000556422 BCL2P10415 239 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 UBE2G1P62253 170 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 SRSF9Q13242 221 aaKnown RBP eCLIP4.05□□□□□ -1.76
TMEM260-210ENST00000556422 CCL17Q92583 94 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 SMIM7Q9BQ49 75 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 MRPL20Q9BYC9 149 aaKnown RBP4.05□□□□□ -1.76
TMEM260-210ENST00000556422 TPSG1Q9NRR2 321 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 CELSR2Q9HCU4 2923 aa4.05□□□□□ -1.76
TMEM260-210ENST00000556422 TRAV8-1A0A0A6YYK1 113 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 ZFP92A6NM28 416 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 VWC2LB2RUY7 222 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 COL8A2P25067 703 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 WDR83OSQ9Y284 106 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 KLK5Q9Y337 293 aaPredicted RBP4.04□□□□□ -1.76
TMEM260-210ENST00000556422 LSM4Q9Y4Z0 139 aaKnown RBP4.04□□□□□ -1.76
TMEM260-210ENST00000556422 CHEK1O14757 476 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 SRD5A1P18405 259 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 LOXP28300 417 aaPredicted RBP4.04□□□□□ -1.76
TMEM260-210ENST00000556422 FBXL19-AS1Q494R0 122 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TREML4Q6UXN2 200 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 ZNF833PQ6ZTB9 187 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM70Q9BUB7 260 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM191AQ9H0A3 160 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 SLC25A22Q9H936 323 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 CHD6Q8TD26 2715 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TRAV8-2A0A0B4J237 113 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 J3QQQ9 107 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 CCL24O00175 119 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 OR8B3Q8NGG8 313 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 LINC01560Q8TB33 94 aa4.04□□□□□ -1.76
TMEM260-210ENST00000556422 TRAV13-1A0A0B4J241 112 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 ERVK-16P61578 105 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 LY6DQ14210 128 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM30BQ3MIR4 351 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 SGMS2Q8NHU3 365 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 C9orf85Q96MD7 179 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 ZNF714Q96N38 554 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 MGST2Q99735 147 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 MRPL32Q9BYC8 188 aaKnown RBP4.03□□□□□ -1.76
TMEM260-210ENST00000556422 KAAG1Q9UBP8 84 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 FLNCQ14315 2725 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 H3BMG7 143 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 MGST1P10620 155 aaKnown RBP4.03□□□□□ -1.76
TMEM260-210ENST00000556422 DLX1P56177 255 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 PPDPFLQ8WWR9 84 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 C16orf92Q96LL3 132 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 LINC01587Q99440 93 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 CHCHD5Q9BSY4 110 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 PRSS22Q9GZN4 317 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 MYO18BQ8IUG5 2567 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 CTXND1A0A1B0GTU2 59 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 E7EUB6 86 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 SPATA12Q7Z6I5 190 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 C11orf45Q8TAV5 145 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 COMMD5Q9GZQ3 224 aa4.03□□□□□ -1.76
TMEM260-210ENST00000556422 IGSF10Q6WRI0 2623 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 USP24Q9UPU5 2620 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 A8MWV9 139 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms