RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 Q6ZR54 194 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 ZNF680Q8NEM1 530 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 ATP5SQ99766 215 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 PARD6GQ9BYG4 376 aaPredicted RBP8.86□□□□□ -0.99
SNX6-207ENST00000556303 FUT9Q9Y231 359 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 C7orf71A4D174 169 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 SNURFLB1AK76 121 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 M0R3E3 92 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 CCL18P55774 89 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 ANXA2RQ3ZCQ2 193 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 GCSAMLQ5JQS6 135 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 BLNKQ8WV28 456 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 C18orf15Q96N68 181 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 HSPB11Q9Y547 144 aa8.85□□□□□ -0.99
SNX6-207ENST00000556303 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 TRAV12-3A0A0B4J271 114 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 H3BNG1 76 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 LCE2BO14633 110 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 ZNF324O75467 553 aaPredicted RBP8.84□□□□□ -0.99
SNX6-207ENST00000556303 IFNA5P01569 189 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 TAS2R45P59539 299 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 TMEM78Q5T7P6 136 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 MIR17HGQ75NE6 70 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 SCGB1C1Q8TD33 95 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
SNX6-207ENST00000556303 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SNX6-207ENST00000556303 M0R2N4 97 aa8.83□□□□□ -1
SNX6-207ENST00000556303 RTL8CO15255 209 aa8.83□□□□□ -1
SNX6-207ENST00000556303 NUDT3O95989 172 aa8.83□□□□□ -1
SNX6-207ENST00000556303 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
SNX6-207ENST00000556303 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
SNX6-207ENST00000556303 CSN1S1P47710 185 aa8.83□□□□□ -1
SNX6-207ENST00000556303 ICAM4Q14773 271 aa8.83□□□□□ -1
SNX6-207ENST00000556303 FXYD5Q96DB9 178 aa8.83□□□□□ -1
SNX6-207ENST00000556303 ZNF492Q9P255 531 aa8.83□□□□□ -1
SNX6-207ENST00000556303 A0A1B0GVY2 172 aa8.82□□□□□ -1
SNX6-207ENST00000556303 PRSS29PA6NIE9 313 aa8.82□□□□□ -1
SNX6-207ENST00000556303 J3KRW8 73 aa8.82□□□□□ -1
SNX6-207ENST00000556303 GPX1P07203 203 aa8.82□□□□□ -1
SNX6-207ENST00000556303 M6PRP20645 277 aa8.82□□□□□ -1
SNX6-207ENST00000556303 ERCC8Q13216 396 aa8.82□□□□□ -1
SNX6-207ENST00000556303 KHDC3LQ587J8 217 aa8.82□□□□□ -1
SNX6-207ENST00000556303 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
SNX6-207ENST00000556303 EIF4E3Q8N5X7 224 aaKnown RBP8.82□□□□□ -1
SNX6-207ENST00000556303 ARL6IP6Q8N6S5 226 aa8.82□□□□□ -1
SNX6-207ENST00000556303 RXFP4Q8TDU9 374 aa8.82□□□□□ -1
SNX6-207ENST00000556303 MUC4Q99102 2169 aa8.81□□□□□ -1
SNX6-207ENST00000556303 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
SNX6-207ENST00000556303 OR7C2O60412 319 aa8.81□□□□□ -1
SNX6-207ENST00000556303 OR5I1Q13606 314 aa8.81□□□□□ -1
SNX6-207ENST00000556303 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
SNX6-207ENST00000556303 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
SNX6-207ENST00000556303 FAM122CQ6P4D5 195 aa8.81□□□□□ -1
SNX6-207ENST00000556303 C11orf72Q8NBR9 251 aa8.81□□□□□ -1
SNX6-207ENST00000556303 ZNRF2Q8NHG8 242 aa8.81□□□□□ -1
SNX6-207ENST00000556303 TMED6Q8WW62 240 aa8.81□□□□□ -1
SNX6-207ENST00000556303 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
SNX6-207ENST00000556303 MBD2Q9UBB5 411 aa8.81□□□□□ -1
SNX6-207ENST00000556303 LENEPQ9Y5L5 61 aa8.81□□□□□ -1
SNX6-207ENST00000556303 GAGE12BA1L429 117 aa8.8□□□□□ -1
SNX6-207ENST00000556303 GAGE7O76087 117 aa8.8□□□□□ -1
SNX6-207ENST00000556303 OR10J4P0C629 311 aa8.8□□□□□ -1
SNX6-207ENST00000556303 GAGE12FP0CL80 117 aa8.8□□□□□ -1
SNX6-207ENST00000556303 GAGE12GP0CL81 117 aa8.8□□□□□ -1
SNX6-207ENST00000556303 GAGE12IP0CL82 117 aa8.8□□□□□ -1
SNX6-207ENST00000556303 RNASE4P34096 147 aaKnown RBP8.8□□□□□ -1
SNX6-207ENST00000556303 ZNF138P52744 262 aa8.8□□□□□ -1
SNX6-207ENST00000556303 TCL1AP56279 114 aa8.8□□□□□ -1
SNX6-207ENST00000556303 CD300CQ08708 224 aa8.8□□□□□ -1
SNX6-207ENST00000556303 ACOT6Q3I5F7 207 aaPredicted RBP8.8□□□□□ -1
SNX6-207ENST00000556303 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
SNX6-207ENST00000556303 ZFAND2AQ8N6M9 145 aa8.8□□□□□ -1
SNX6-207ENST00000556303 VGLL1Q99990 258 aa8.8□□□□□ -1
SNX6-207ENST00000556303 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
SNX6-207ENST00000556303 IGKV2-40A0A087WW87 121 aaPredicted RBP8.79□□□□□ -1
SNX6-207ENST00000556303 RGS13O14921 159 aa8.79□□□□□ -1
SNX6-207ENST00000556303 PTTG1O95997 202 aa8.79□□□□□ -1
SNX6-207ENST00000556303 IGKV2D-40P01614 121 aaPredicted RBP8.79□□□□□ -1
SNX6-207ENST00000556303 RANP62826 216 aaKnown RBP8.79□□□□□ -1
SNX6-207ENST00000556303 UBE2L3P68036 154 aaKnown RBP8.79□□□□□ -1
SNX6-207ENST00000556303 BTN1A1Q13410 526 aa8.79□□□□□ -1
SNX6-207ENST00000556303 ZNF266Q14584 549 aa8.79□□□□□ -1
SNX6-207ENST00000556303 FAM74A1Q5RGS3 127 aa8.79□□□□□ -1
SNX6-207ENST00000556303 ASB13Q8WXK3 278 aa8.79□□□□□ -1
SNX6-207ENST00000556303 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
SNX6-207ENST00000556303 Q9H3A6 140 aa8.79□□□□□ -1
SNX6-207ENST00000556303 GSN-AS1Q9NRJ2 163 aa8.79□□□□□ -1
SNX6-207ENST00000556303 LINC00588Q9Y4M8 146 aa8.79□□□□□ -1
SNX6-207ENST00000556303 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
SNX6-207ENST00000556303 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
SNX6-207ENST00000556303 NBDYA0A0U1RRE5 68 aa8.78□□□□□ -1
SNX6-207ENST00000556303 A0A1W2PPV4 95 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms