RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 FNDC10F2Z333 226 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 SFT2D2O95562 160 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 CXCL2P19875 107 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 LINC00315P59091 139 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 DLK1P80370 383 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 AKR1C1Q04828 323 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 GFI1BQ5VTD9 330 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 S100A7AQ86SG5 101 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 ZNF431Q8TF32 576 aaPredicted RBP6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 TMED6Q8WW62 240 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 SAT2Q96F10 170 aaPredicted RBP6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 SMIM8Q96KF7 97 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 SLC25A21Q9BQT8 299 aaPredicted RBP6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 NPVFQ9HCQ7 196 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.44
GTF2A1-204ENST00000556268 SRRM2Q9UQ35 2752 aaKnown RBP6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 FABP12A6NFH5 140 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 GAGE7O76087 117 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 RLN2P04090 185 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 OR5G3P0C626 314 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 LINC00869P0C866 280 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 GAGE12FP0CL80 117 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 GAGE12GP0CL81 117 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 GAGE12IP0CL82 117 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 POLR2GP62487 172 aaKnown RBP eCLIP6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 TMEM14EPQ6UXP3 125 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 CCDC190Q86UF4 302 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 LRRC20Q8TCA0 184 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 SLIRPQ9GZT3 109 aaKnown RBP6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 ARV1Q9H2C2 271 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 CCDC59Q9P031 241 aaKnown RBP6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 RNF24Q9Y225 148 aa6.08□□□□□ -1.44
GTF2A1-204ENST00000556268 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 SIVA1O15304 175 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 HOXB5P09067 269 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 PRB4P10163 310 aaPredicted RBP6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 ANXA7P20073 488 aaKnown RBP6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 PPP1R1AQ13522 171 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 LCN15Q6UWW0 184 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 Q6ZTI0 123 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 TMED4Q7Z7H5 227 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 DEDD2Q8WXF8 326 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 TMEM37Q8WXS4 190 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 TRIM63Q969Q1 353 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 ODF3Q96PU9 254 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 SLC50A1Q9BRV3 221 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 PARD6GQ9BYG4 376 aaPredicted RBP6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 ARL6Q9H0F7 186 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 PSENENQ9NZ42 101 aa6.07□□□□□ -1.44
GTF2A1-204ENST00000556268 SNURFLB1AK76 121 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 H3BP45 60 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 H3BQ15 152 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 ZNF324O75467 553 aaPredicted RBP6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 CCNKO75909 580 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 IGLC2P0DOY2 106 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 FAUP35544 74 aaKnown RBP6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 TMBIM6P55061 237 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 LINC00305Q7Z4B0 112 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 BPIFA4PQ86YQ2 179 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 BCL7BQ9BQE9 202 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 GGACTQ9BVM4 153 aa6.06□□□□□ -1.44
GTF2A1-204ENST00000556268 A0A087WTM6 91 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 LINC00854A0A1B0GVQ3 168 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 SMCO3A2RU48 225 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 SLC25A5P05141 298 aaKnown RBP6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 FUSP35637 526 aaKnown RBP eCLIP6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 TAS2R30P59541 319 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 AP3S2P59780 193 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 UBE2MP61081 183 aaKnown RBP6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 ARL16Q0P5N6 197 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 RAB2BQ8WUD1 216 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 FAM19A4Q96LR4 140 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 DNAJC4Q9NNZ3 241 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 GSN-AS1Q9NRJ2 163 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 PTTG2Q9NZH5 202 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 PXMP4Q9Y6I8 212 aa6.05□□□□□ -1.44
GTF2A1-204ENST00000556268 IGLV5-52A0A0A0MRZ9 124 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 C9orf170A2RU37 121 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 KLLNB2CW77 178 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 SLC17A3O00476 420 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 GOSR2O14653 212 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 AGPAT2O15120 278 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 SPINK4O60575 86 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 METTL15P1P0C7V9 234 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 LEPP41159 167 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 SLC38A11Q08AI6 406 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 OPCMLQ14982 345 aa6.04□□□□□ -1.44
GTF2A1-204ENST00000556268 GUK1Q16774 197 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms