RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 M0R381 172 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 NPFFO15130 113 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 EVI2AP22794 236 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 D6R8Y8 96 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
NEK9-209ENST00000556170 C7orf71A4D174 169 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 SH2D1AO60880 128 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 ZNF462Q96JM2 2506 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 FAM231DQ6ZW35 169 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 H3BUX3 64 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 DYNAPQ8N1N2 210 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
NEK9-209ENST00000556170 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 SPCS1Q9Y6A9 102 aa11.69□□□□□ -0.54
NEK9-209ENST00000556170 ORMDL3Q8N138 153 aa11.68□□□□□ -0.54
NEK9-209ENST00000556170 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
NEK9-209ENST00000556170 OR10J6PQ8NGY7 276 aa11.68□□□□□ -0.54
NEK9-209ENST00000556170 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 H3BRN7 92 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 TGFAP01135 160 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 GTSF1Q8WW33 167 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 VGLL1Q99990 258 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 CRYGCP07315 174 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 GCSHP23434 173 aa11.67□□□□□ -0.54
NEK9-209ENST00000556170 UBE2E1P51965 193 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 TP53TG3Q9ULZ0 132 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 LTAP01374 205 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 IGHV2-70DA0A0C4DH43 119 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 PAX8Q06710 450 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 OR2K2Q8NGT1 345 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 MAP1LC3AQ9H492 121 aa11.66□□□□□ -0.54
NEK9-209ENST00000556170 MTORP42345 2549 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
NEK9-209ENST00000556170 IFI27P40305 119 aaPredicted RBP11.65□□□□□ -0.54
NEK9-209ENST00000556170 CKS1BP61024 79 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 OOSP1A8MZH6 123 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 PAX2Q02962 417 aa11.65□□□□□ -0.54
NEK9-209ENST00000556170 MRPL27Q9P0M9 148 aaKnown RBP11.65□□□□□ -0.54
NEK9-209ENST00000556170 A0A087X0K7 114 aa11.65□□□□□ -0.55
NEK9-209ENST00000556170 GDF5OSQ5U4N7 250 aa11.65□□□□□ -0.55
NEK9-209ENST00000556170 LINC00173Q6ZV60 143 aa11.65□□□□□ -0.55
NEK9-209ENST00000556170 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.55
NEK9-209ENST00000556170 ZFHX4Q86UP3 3567 aa11.65□□□□□ -0.55
NEK9-209ENST00000556170 SAP30O75446 220 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 RAB9AP51151 201 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
NEK9-209ENST00000556170 FANCD2OSQ96PS1 177 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 PSMB11A5LHX3 300 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 LINC01548A6NM66 108 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 NRGNQ92686 78 aa11.64□□□□□ -0.55
NEK9-209ENST00000556170 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
NEK9-209ENST00000556170 CACNG7P62955 275 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 RAI1Q7Z5J4 1906 aaPredicted RBP11.63□□□□□ -0.55
NEK9-209ENST00000556170 SPRY2O43597 315 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 CTSGP08311 255 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 ESDP10768 282 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 Q6AWC8 147 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 MRPS16Q9Y3D3 137 aaKnown RBP11.63□□□□□ -0.55
NEK9-209ENST00000556170 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 ZNF492Q9P255 531 aa11.63□□□□□ -0.55
NEK9-209ENST00000556170 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
NEK9-209ENST00000556170 PRR25Q96S07 402 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 MOB4Q9Y3A3 225 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 IGLV11-55A0A075B6I3 123 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 FBXL19-AS1Q494R0 122 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 H3BVH4 76 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
NEK9-209ENST00000556170 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
NEK9-209ENST00000556170 C19orf84I3L1E1 186 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 IL17RELQ6ZVW7 336 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 Q71RC1 249 aaPredicted RBP11.61□□□□□ -0.55
NEK9-209ENST00000556170 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
NEK9-209ENST00000556170 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 Q8N9W7 124 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 CRYGBP07316 175 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 IGLL1P15814 213 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
NEK9-209ENST00000556170 RNF114Q9Y508 228 aa11.61□□□□□ -0.55
NEK9-209ENST00000556170 LRBAP50851 2863 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms