RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 LCE6AA0A183 80 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 LYRM9A8MSI8 78 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 K7EQM0 130 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 ARL14EPLP0DKL9 152 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 ZNF138P52744 262 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 PYGO2Q9BRQ0 406 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 AGPAT4-IT1Q9H0P7 198 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 SH3BGRL3Q9H299 93 aa16.44■□□□□ 0.22
CDKN3-208ENST00000555837 PGPA6NDG6 321 aa16.43■□□□□ 0.22
CDKN3-208ENST00000555837 GPX1P07203 203 aa16.43■□□□□ 0.22
CDKN3-208ENST00000555837 TMED6Q8WW62 240 aa16.43■□□□□ 0.22
CDKN3-208ENST00000555837 DKK2Q9UBU2 259 aa16.43■□□□□ 0.22
CDKN3-208ENST00000555837 YTHDF2Q9Y5A9 579 aaKnown RBP16.43■□□□□ 0.22
CDKN3-208ENST00000555837 CTXND1A0A1B0GTU2 59 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 PFDN1O60925 122 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 CRISP2P16562 243 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 GFI1BQ5VTD9 330 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 STOML3Q8TAV4 291 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 TMEM263Q8WUH6 116 aaKnown RBP16.42■□□□□ 0.22
CDKN3-208ENST00000555837 NKX6-2Q9C056 277 aaPredicted RBP16.42■□□□□ 0.22
CDKN3-208ENST00000555837 ZNF492Q9P255 531 aa16.42■□□□□ 0.22
CDKN3-208ENST00000555837 C7orf71A4D174 169 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 ZNF705GA8MUZ8 300 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-208ENST00000555837 SMLR1H3BR10 107 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 HTN1P15515 57 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 GCHFRP30047 84 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 FAM222AQ5U5X8 452 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 ST6GAL2Q96JF0 529 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 HYLS1Q96M11 299 aa16.41■□□□□ 0.22
CDKN3-208ENST00000555837 IGKV2-40A0A087WW87 121 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-208ENST00000555837 FBLL1A6NHQ2 334 aaKnown RBP16.4■□□□□ 0.22
CDKN3-208ENST00000555837 KLLNB2CW77 178 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 UMAD1C9J7I0 102 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 DIRC3C9JPN6 131 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 HMGB3O15347 200 aaKnown RBP16.4■□□□□ 0.22
CDKN3-208ENST00000555837 IGKV2D-40P01614 121 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-208ENST00000555837 DAD1P61803 113 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 ERCC8Q13216 396 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 C12orf74Q32Q52 190 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 Q6ZTC4 211 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 FAM210BQ96KR6 192 aa16.4■□□□□ 0.22
CDKN3-208ENST00000555837 TIMM8BQ9Y5J9 83 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-208ENST00000555837 DEFB131BA0A096LNP1 70 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 TRAV12-3A0A0B4J271 114 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 BCL2L11O43521 198 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 SEC11BP0C7V7 166 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 EIF5AL1Q6IS14 154 aaKnown RBP16.39■□□□□ 0.21
CDKN3-208ENST00000555837 Q6ZNX1 250 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 IQCF2Q8IXL9 164 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 TCTE3Q8IZS6 198 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 C5orf17Q8NAS9 161 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 ZNF680Q8NEM1 530 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 SUN5Q8TC36 379 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 FAM19A4Q96LR4 140 aa16.39■□□□□ 0.21
CDKN3-208ENST00000555837 ZNF471Q9BX82 626 aaPredicted RBP16.39■□□□□ 0.21
CDKN3-208ENST00000555837 NDFIP1Q9BT67 221 aa16.38■□□□□ 0.21
CDKN3-208ENST00000555837 CYTL1Q9NRR1 136 aa16.38■□□□□ 0.21
CDKN3-208ENST00000555837 CELA1Q9UNI1 258 aa16.38■□□□□ 0.21
CDKN3-208ENST00000555837 SNURFLB1AK76 121 aa16.37■□□□□ 0.21
CDKN3-208ENST00000555837 J3KRW8 73 aa16.37■□□□□ 0.21
CDKN3-208ENST00000555837 VGLL1Q99990 258 aa16.37■□□□□ 0.21
CDKN3-208ENST00000555837 LINC00467Q9BRT7 94 aa16.37■□□□□ 0.21
CDKN3-208ENST00000555837 A0A1W2PRE2 83 aa16.36■□□□□ 0.21
CDKN3-208ENST00000555837 IGLL5B9A064 214 aa16.36■□□□□ 0.21
CDKN3-208ENST00000555837 PRB4P10163 310 aaPredicted RBP16.36■□□□□ 0.21
CDKN3-208ENST00000555837 TPT1P13693 172 aaKnown RBP16.36■□□□□ 0.21
CDKN3-208ENST00000555837 RNASE4P34096 147 aaKnown RBP16.36■□□□□ 0.21
CDKN3-208ENST00000555837 DPPA3Q6W0C5 159 aa16.36■□□□□ 0.21
CDKN3-208ENST00000555837 TENM2Q9NT68 2774 aa16.35■□□□□ 0.21
CDKN3-208ENST00000555837 EIF4E3Q8N5X7 224 aaKnown RBP16.35■□□□□ 0.21
CDKN3-208ENST00000555837 OR11H4Q8NGC9 324 aa16.35■□□□□ 0.21
CDKN3-208ENST00000555837 RGS13O14921 159 aa16.34■□□□□ 0.21
CDKN3-208ENST00000555837 TMUB2Q71RG4 321 aa16.34■□□□□ 0.21
CDKN3-208ENST00000555837 RNASE8Q8TDE3 154 aaKnown RBP16.34■□□□□ 0.21
CDKN3-208ENST00000555837 RPH3ALQ9UNE2 315 aa16.34■□□□□ 0.21
CDKN3-208ENST00000555837 CBY3A6NI87 242 aa16.33■□□□□ 0.2
CDKN3-208ENST00000555837 ANXA2RQ3ZCQ2 193 aa16.33■□□□□ 0.2
CDKN3-208ENST00000555837 GOLT1AQ6ZVE7 132 aa16.33■□□□□ 0.2
CDKN3-208ENST00000555837 AKAP14Q86UN6 197 aa16.33■□□□□ 0.2
CDKN3-208ENST00000555837 NDUFAF3Q9BU61 184 aa16.33■□□□□ 0.2
CDKN3-208ENST00000555837 CSMD3Q7Z407 3707 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 MAP1LC3B2A6NCE7 125 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 EIF3GO75821 320 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDKN3-208ENST00000555837 AZU1P20160 251 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 PPT1P50897 306 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 SUMO1P63165 101 aaKnown RBP16.32■□□□□ 0.2
CDKN3-208ENST00000555837 LGALSLQ3ZCW2 172 aaPredicted RBP16.32■□□□□ 0.2
CDKN3-208ENST00000555837 ZFAND2AQ8N6M9 145 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 LINC00476Q8WZB0 136 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 TCEAL7Q9BRU2 100 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 MAP1LC3BQ9GZQ8 125 aa16.32■□□□□ 0.2
CDKN3-208ENST00000555837 F6UZH7 168 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 ZNF324O75467 553 aaPredicted RBP16.31■□□□□ 0.2
CDKN3-208ENST00000555837 C1QBP02746 253 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 BTN1A1Q13410 526 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 KIR3DS1Q14943 382 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 LGALS9CQ6DKI2 356 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 ZNF767PQ75MW2 155 aa16.31■□□□□ 0.2
CDKN3-208ENST00000555837 IGHV4-4A0A075B6R2 117 aa16.3■□□□□ 0.2
CDKN3-208ENST00000555837 TEX46H3BTG2 121 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms