RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
XRCC3-214ENST00000555832 CYTL1Q9NRR1 136 aa12.43□□□□□ -0.42
XRCC3-214ENST00000555832 TRAV12-2A0A075B6T6 113 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 DEFB4AO15263 64 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 GPX1P07203 203 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 ZNF138P52744 262 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 DPPA3Q6W0C5 159 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 LENEPQ9Y5L5 61 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 COL7A1Q02388 2944 aa12.42□□□□□ -0.42
XRCC3-214ENST00000555832 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
XRCC3-214ENST00000555832 CRXO43186 299 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-214ENST00000555832 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
XRCC3-214ENST00000555832 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
XRCC3-214ENST00000555832 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 TMED6Q8WW62 240 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
XRCC3-214ENST00000555832 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-214ENST00000555832 DIRC3C9JPN6 131 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 TEX46H3BTG2 121 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-214ENST00000555832 EMP1P54849 157 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 CEMP1Q6PRD7 247 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-214ENST00000555832 C16orf74Q96GX8 76 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 PYGO2Q9BRQ0 406 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 NDFIP1Q9BT67 221 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
XRCC3-214ENST00000555832 A0A1W2PRE2 83 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 C7orf71A4D174 169 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 HTN1P15515 57 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 CRISP2P16562 243 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 RAB5CP51148 216 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 ERCC8Q13216 396 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 LGALSLQ3ZCW2 172 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-214ENST00000555832 ZFP69Q49AA0 526 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 SUN5Q8TC36 379 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 PHLDA1Q8WV24 401 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-214ENST00000555832 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
XRCC3-214ENST00000555832 J3KRW8 73 aa12.38□□□□□ -0.43
XRCC3-214ENST00000555832 NANOS2P60321 138 aaKnown RBP12.38□□□□□ -0.43
XRCC3-214ENST00000555832 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
XRCC3-214ENST00000555832 TENM3Q9P273 2699 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 F6UZH7 168 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
XRCC3-214ENST00000555832 IFNA7P01567 189 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 PPT1P50897 306 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 TCTAP57738 103 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
XRCC3-214ENST00000555832 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 TMEM263Q8WUH6 116 aaKnown RBP12.37□□□□□ -0.43
XRCC3-214ENST00000555832 VGLL1Q99990 258 aa12.37□□□□□ -0.43
XRCC3-214ENST00000555832 YTHDF2Q9Y5A9 579 aaKnown RBP12.37□□□□□ -0.43
XRCC3-214ENST00000555832 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-214ENST00000555832 KLLNB2CW77 178 aa12.36□□□□□ -0.43
XRCC3-214ENST00000555832 PRB4P10163 310 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-214ENST00000555832 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
XRCC3-214ENST00000555832 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
XRCC3-214ENST00000555832 TCEAL7Q9BRU2 100 aa12.36□□□□□ -0.43
XRCC3-214ENST00000555832 TIMM8BQ9Y5J9 83 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-214ENST00000555832 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 RGS13O14921 159 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 H2AFB1P0C5Y9 115 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 DAD1P61803 113 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 ZNF680Q8NEM1 530 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 DKK2Q9UBU2 259 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 EPDR1Q9UM22 224 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
XRCC3-214ENST00000555832 TCRAP04437 139 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 ZNF726P1Q15940 193 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 HIST1H2BAQ96A08 127 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 ATG101Q9BSB4 218 aa12.34□□□□□ -0.43
XRCC3-214ENST00000555832 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
XRCC3-214ENST00000555832 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
XRCC3-214ENST00000555832 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
XRCC3-214ENST00000555832 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
XRCC3-214ENST00000555832 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
XRCC3-214ENST00000555832 CBY3A6NI87 242 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 FHITP49789 147 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 CST9LP1Q5W188 147 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 Q8TAT8 98 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
XRCC3-214ENST00000555832 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms