RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 GRNP28799 593 aaKnown RBP13.91□□□□□ -0.18
RCCD1-204ENST00000555737 CSTL1Q9H114 145 aa13.91□□□□□ -0.18
RCCD1-204ENST00000555737 NHP2Q9NX24 153 aaKnown RBP13.91□□□□□ -0.18
RCCD1-204ENST00000555737 BSNQ9UPA5 3926 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.9□□□□□ -0.18
RCCD1-204ENST00000555737 C9orf118A6NHY6 69 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 PLP1P60201 277 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 SEC11AP67812 179 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 OR1N2Q8NGR9 330 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 CRYGBP07316 175 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 APOBEC3AP31941 199 aaPredicted RBP13.9□□□□□ -0.18
RCCD1-204ENST00000555737 SFTA2Q6UW10 78 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 TMEM14CQ9P0S9 112 aa13.9□□□□□ -0.18
RCCD1-204ENST00000555737 PPBPP02775 128 aa13.89□□□□□ -0.19
RCCD1-204ENST00000555737 FXYD2P54710 66 aa13.89□□□□□ -0.19
RCCD1-204ENST00000555737 Q6ZQT7 251 aa13.89□□□□□ -0.19
RCCD1-204ENST00000555737 SPG11Q96JI7 2443 aa13.88□□□□□ -0.19
RCCD1-204ENST00000555737 PRAC2D3DTV9 90 aa13.88□□□□□ -0.19
RCCD1-204ENST00000555737 NBR2O15453 112 aa13.88□□□□□ -0.19
RCCD1-204ENST00000555737 ECSCRQ19T08 205 aa13.88□□□□□ -0.19
RCCD1-204ENST00000555737 PRR25Q96S07 402 aa13.88□□□□□ -0.19
RCCD1-204ENST00000555737 SHISA9B4DS77 424 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 NDPQ00604 133 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 MFAP4P55083 255 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 HSD52Q0P140 79 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 C21orf62Q9NYP8 219 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
RCCD1-204ENST00000555737 FABP2P12104 132 aa13.86□□□□□ -0.19
RCCD1-204ENST00000555737 ZC2HC1BQ5TFG8 222 aa13.86□□□□□ -0.19
RCCD1-204ENST00000555737 SAMD5Q5TGI4 173 aa13.86□□□□□ -0.19
RCCD1-204ENST00000555737 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
RCCD1-204ENST00000555737 MAP1LC3AQ9H492 121 aa13.86□□□□□ -0.19
RCCD1-204ENST00000555737 IGKV3-7A0A075B6H7 116 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 H3BRM9 83 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 MUC6Q6W4X9 2439 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 K7EP34 96 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 TNFRSF13BO14836 293 aaPredicted RBP13.85□□□□□ -0.19
RCCD1-204ENST00000555737 NDUFA3O95167 84 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 CD3EP07766 207 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 BMI1P35226 326 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 LGALS9BQ3B8N2 356 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 LGALS9CQ6DKI2 356 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 TRAV40A0A0B4J280 105 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 PVRIGQ6DKI7 326 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 AMTNQ6UX39 209 aa13.85□□□□□ -0.19
RCCD1-204ENST00000555737 A0A1W2PPM0 123 aa13.84□□□□□ -0.19
RCCD1-204ENST00000555737 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
RCCD1-204ENST00000555737 DYNAPQ8N1N2 210 aa13.84□□□□□ -0.19
RCCD1-204ENST00000555737 GTSF1LQ9H1H1 148 aa13.84□□□□□ -0.19
RCCD1-204ENST00000555737 PTPRQQ9UMZ3 2332 aa13.84□□□□□ -0.19
RCCD1-204ENST00000555737 CEACAM4O75871 244 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 TNFRSF6BO95407 300 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 TRGV3P03979 118 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 SMIM13P0DJ93 91 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 PIP4P1Q86T03 277 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 DPM3Q9P2X0 92 aa13.83□□□□□ -0.19
RCCD1-204ENST00000555737 EFNA4P52798 201 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 C3orf36Q3SXR2 165 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 Q6AWC8 147 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 ADAMTSL5Q6ZMM2 481 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 CREBBPQ92793 2442 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 TMEM8BA6NDV4 472 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 HOXB4P17483 251 aaPredicted RBP13.83□□□□□ -0.2
RCCD1-204ENST00000555737 PAX2Q02962 417 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
RCCD1-204ENST00000555737 HIF1ANQ9NWT6 349 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 AGRNO00468 2067 aa13.83□□□□□ -0.2
RCCD1-204ENST00000555737 ARPC1AQ92747 370 aa13.82□□□□□ -0.2
RCCD1-204ENST00000555737 TEX48A0A1B0GUV7 120 aa13.82□□□□□ -0.2
RCCD1-204ENST00000555737 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
RCCD1-204ENST00000555737 KAAG1Q9UBP8 84 aa13.82□□□□□ -0.2
RCCD1-204ENST00000555737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.22e-8■■□□□ 13.8
RCCD1-204ENST00000555737 MRPS12O15235 138 aaKnown RBP13.81□□□□□ -0.2
RCCD1-204ENST00000555737 RPL7P18124 248 aaKnown RBP13.81□□□□□ -0.2
RCCD1-204ENST00000555737 A0A1B0GW15 77 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 DEFB1P60022 68 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 SMAGPQ0VAQ4 97 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 WFDC12Q8WWY7 111 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
RCCD1-204ENST00000555737 COL25A1Q9BXS0 654 aaPredicted RBP13.81□□□□□ -0.2
RCCD1-204ENST00000555737 C5orf64Q2M2E5 130 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 ZNF493Q6ZR52 646 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 OR9G4Q8NGQ1 327 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 CFHR4Q92496 578 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 IGFL3Q6UXB1 125 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 MRPL35Q9NZE8 188 aaKnown RBP13.8□□□□□ -0.2
RCCD1-204ENST00000555737 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 ZFHX3Q15911 3703 aa13.8□□□□□ -0.2
RCCD1-204ENST00000555737 CLEC3BP05452 202 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 DTX2Q86UW9 622 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 OR4X2Q8NGF9 303 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 IGKCP01834 107 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 SH2D6Q7Z4S9 175 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms