RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 KLRD1Q13241 179 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 EIF3IQ13347 325 aaKnown RBP0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TMEM128Q5BJH2 165 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TRIQKQ629K1 86 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 EIF5AL1Q6IS14 154 aaKnown RBP0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TEX261Q6UWH6 196 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TAC4Q86UU9 113 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 FAM216BQ8N7L0 139 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 MORN4Q8NDC4 146 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 OR5D14Q8NGL3 314 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 MUCL1Q96DR8 90 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TP53RKQ96S44 253 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 NABP2Q9BQ15 211 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 TMEM70Q9BUB7 260 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 CBLN4Q9NTU7 201 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 RASL12Q9NYN1 266 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 ATPIF1Q9UII2 106 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 U3KQ87 197 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 ZNF292O60281 2723 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 HECTD1Q9ULT8 2610 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 KIAA1549LQ6ZVL6 1849 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 ZFYVE26Q68DK2 2539 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 UNC13AQ9UPW8 1703 aa0.24□□□□□ -2.37
SCFD1-216ENST00000555550 PTPRGP23470 1445 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 TRBV6-7A0A0A0MS04 114 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 H0YJX3 145 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 CST8O60676 142 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 IFNA14P01570 189 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 CD2P06729 351 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 CDK6Q00534 326 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 ANGPTL5Q86XS5 388 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 FAM24BQ8N5W8 94 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 TMEM254Q8TBM7 123 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 C4orf3Q8WVX3 66 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 EFCAB11Q9BUY7 163 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 PBDC1Q9BVG4 233 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 ORMDL1Q9P0S3 153 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 CHD8Q9HCK8 2581 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 FASNP49327 2511 aaKnown RBP0.23□□□□□ -2.37
SCFD1-216ENST00000555550 MEGF8Q7Z7M0 2845 aa0.23□□□□□ -2.37
SCFD1-216ENST00000555550 ARHGAP31Q2M1Z3 1444 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 MED23Q9ULK4 1368 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 FANCMQ8IYD8 2048 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 A0A1B0GV72 72 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 A0A1B0GW64 132 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 A0A1B0GX51 115 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 ZNF727A8MUV8 499 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 M0R233 179 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 KPNA4O00629 521 aaPredicted RBP0.22□□□□□ -2.37
SCFD1-216ENST00000555550 KLF7O75840 302 aaPredicted RBP0.22□□□□□ -2.37
SCFD1-216ENST00000555550 APOA2P02652 100 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 COX7CP15954 63 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 PDE6GP18545 87 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 OR10AG1Q8NH19 301 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 AMELYQ99218 206 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 LIMD2Q9BT23 127 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 C6orf62Q9GZU0 229 aaPredicted RBP0.22□□□□□ -2.37
SCFD1-216ENST00000555550 JPT1Q9UK76 154 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 EML5Q05BV3 1969 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 TANC2Q9HCD6 1990 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 PTPRDP23468 1912 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 DLC1Q96QB1 1528 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 KIDINS220Q9ULH0 1771 aa0.22□□□□□ -2.37
SCFD1-216ENST00000555550 ANKRD30AQ9BXX3 1397 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 A0A0D9SG42 100 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 NBDYA0A0U1RRE5 68 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 H3BQV1 296 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 IFNA21P01568 189 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 IGHV3-30P01768 117 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 IGHV3-30-5P0DP03 117 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 RPL22P35268 128 aaKnown RBP0.21□□□□□ -2.38
SCFD1-216ENST00000555550 MYL5Q02045 173 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 ASB16-AS1Q495Z4 193 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 IZUMO2Q6UXV1 221 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 OR9Q1Q8NGQ5 310 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 OR4K15Q8NH41 348 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 GINS2Q9Y248 185 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 PIEZO1Q92508 2521 aa0.21□□□□□ -2.38
SCFD1-216ENST00000555550 ZFC3H1O60293 1989 aaKnown RBP0.21□□□□□ -2.38
SCFD1-216ENST00000555550 ANKRD11Q6UB99 2663 aaPredicted RBP0.2□□□□□ -2.38
SCFD1-216ENST00000555550 SLC25A5P05141 298 aaKnown RBP0.2□□□□□ -2.38
SCFD1-216ENST00000555550 CD14P08571 375 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 SCTP09683 121 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 FABP4P15090 132 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 CSAG1Q6PB30 78 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 HAGHLQ6PII5 290 aaPredicted RBP0.2□□□□□ -2.38
SCFD1-216ENST00000555550 SPATA8Q6RVD6 105 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 C2orf82Q6UX34 121 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 PLPP5Q8NEB5 264 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 CLEC2BQ92478 149 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 ISOC1Q96CN7 298 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 CST11Q9H112 138 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 FKBP11Q9NYL4 201 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 MED11Q9P086 117 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 LAMTOR3Q9UHA4 124 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 TRAPPC2LQ9UL33 140 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.2□□□□□ -2.38
SCFD1-216ENST00000555550 A2MP01023 1474 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 FGD6Q6ZV73 1430 aa0.2□□□□□ -2.38
SCFD1-216ENST00000555550 ASCC3Q8N3C0 2202 aaKnown RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms