RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RNASE8Q8TDE3 154 aaKnown RBP14.54□□□□□ -0.08
VTI1B-205ENST00000555543 TRAV12-3A0A0B4J271 114 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 LYRM9A8MSI8 78 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 SMLR1H3BR10 107 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 M6PRP20645 277 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 HSD17B11Q8NBQ5 300 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 C16orf74Q96GX8 76 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 FAM19A4Q96LR4 140 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 VGLL1Q99990 258 aa14.53□□□□□ -0.08
VTI1B-205ENST00000555543 ZNF266Q14584 549 aa14.52□□□□□ -0.09
VTI1B-205ENST00000555543 ACOT6Q3I5F7 207 aaPredicted RBP14.52□□□□□ -0.09
VTI1B-205ENST00000555543 C9orf47Q6ZRZ4 202 aa14.52□□□□□ -0.09
VTI1B-205ENST00000555543 NDUFAF3Q9BU61 184 aa14.52□□□□□ -0.09
VTI1B-205ENST00000555543 FRAS1Q86XX4 4008 aa14.52□□□□□ -0.09
VTI1B-205ENST00000555543 RNF222A6NCQ9 220 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 KLLNB2CW77 178 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 G3V3Q6 166 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 DEFB130BP0DP73 79 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 DEFB130AP0DP74 79 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 TAS2R45P59539 299 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 RANP62826 216 aaKnown RBP14.51□□□□□ -0.09
VTI1B-205ENST00000555543 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
VTI1B-205ENST00000555543 LINC00477Q96M19 166 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 Q9H3A6 140 aa14.51□□□□□ -0.09
VTI1B-205ENST00000555543 FXYD6-FXYD2A0A087WZ82 144 aa14.5□□□□□ -0.09
VTI1B-205ENST00000555543 BTN1A1Q13410 526 aa14.5□□□□□ -0.09
VTI1B-205ENST00000555543 ZNF493Q6ZR52 646 aa14.5□□□□□ -0.09
VTI1B-205ENST00000555543 HYLS1Q96M11 299 aa14.5□□□□□ -0.09
VTI1B-205ENST00000555543 C7orf71A4D174 169 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 HMGB3O15347 200 aaKnown RBP14.49□□□□□ -0.09
VTI1B-205ENST00000555543 SLC25A5P05141 298 aaKnown RBP14.49□□□□□ -0.09
VTI1B-205ENST00000555543 CRISP2P16562 243 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 ATP6V0CP27449 155 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 PRR9Q5T870 116 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 LYPD1Q8N2G4 141 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 OR10G4Q8NGN3 311 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 OR10G9Q8NGN4 311 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 OR10G7Q8NGN6 311 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 OR2G3Q8NGZ4 309 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 Q8TAT8 98 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 NOP10Q9NPE3 64 aaKnown RBP14.49□□□□□ -0.09
VTI1B-205ENST00000555543 TNFSF18Q9UNG2 199 aa14.49□□□□□ -0.09
VTI1B-205ENST00000555543 TIMM8BQ9Y5J9 83 aaPredicted RBP14.49□□□□□ -0.09
VTI1B-205ENST00000555543 A0A1W2PPV4 95 aa14.48□□□□□ -0.09
VTI1B-205ENST00000555543 TMEM78Q5T7P6 136 aa14.48□□□□□ -0.09
VTI1B-205ENST00000555543 ZFAND2AQ8N6M9 145 aa14.48□□□□□ -0.09
VTI1B-205ENST00000555543 PSMG3Q9BT73 122 aaPredicted RBP14.48□□□□□ -0.09
VTI1B-205ENST00000555543 SH3BGRL3Q9H299 93 aa14.48□□□□□ -0.09
VTI1B-205ENST00000555543 ZNF492Q9P255 531 aa14.48□□□□□ -0.09
VTI1B-205ENST00000555543 ZNF324O75467 553 aaPredicted RBP14.47□□□□□ -0.09
VTI1B-205ENST00000555543 TMEM88Q6PEY1 159 aa14.47□□□□□ -0.09
VTI1B-205ENST00000555543 PQLC2Q6ZP29 291 aa14.47□□□□□ -0.09
VTI1B-205ENST00000555543 INO80EQ8NBZ0 244 aaPredicted RBP14.47□□□□□ -0.09
VTI1B-205ENST00000555543 OR11H4Q8NGC9 324 aa14.47□□□□□ -0.09
VTI1B-205ENST00000555543 FAM210BQ96KR6 192 aa14.47□□□□□ -0.09
VTI1B-205ENST00000555543 RNASE4P34096 147 aaKnown RBP14.46□□□□□ -0.09
VTI1B-205ENST00000555543 CSN1S1P47710 185 aa14.46□□□□□ -0.09
VTI1B-205ENST00000555543 NKX2-5P52952 324 aaPredicted RBP14.46□□□□□ -0.09
VTI1B-205ENST00000555543 RPL7L1Q6DKI1 246 aaKnown RBP14.46□□□□□ -0.09
VTI1B-205ENST00000555543 Q6ZQT7 251 aa14.46□□□□□ -0.09
VTI1B-205ENST00000555543 CCDC28AQ8IWP9 274 aa14.46□□□□□ -0.09
VTI1B-205ENST00000555543 PYGO2Q9BRQ0 406 aa14.46□□□□□ -0.09
VTI1B-205ENST00000555543 GPX1P07203 203 aa14.45□□□□□ -0.1
VTI1B-205ENST00000555543 ARL14EPLP0DKL9 152 aa14.45□□□□□ -0.1
VTI1B-205ENST00000555543 CDC34P49427 236 aaPredicted RBP14.45□□□□□ -0.1
VTI1B-205ENST00000555543 ZNF138P52744 262 aa14.45□□□□□ -0.1
VTI1B-205ENST00000555543 OTORQ9NRC9 128 aa14.45□□□□□ -0.1
VTI1B-205ENST00000555543 RBAKDNA6NC62 111 aa14.44□□□□□ -0.1
VTI1B-205ENST00000555543 HMSDA8MTL9 139 aa14.44□□□□□ -0.1
VTI1B-205ENST00000555543 DIRC3C9JPN6 131 aa14.44□□□□□ -0.1
VTI1B-205ENST00000555543 NMBP08949 121 aa14.44□□□□□ -0.1
VTI1B-205ENST00000555543 LINC00612Q8N6U2 182 aa14.44□□□□□ -0.1
VTI1B-205ENST00000555543 PGPA6NDG6 321 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 CBY3A6NI87 242 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 ATP5G1P05496 136 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 STAG3L2P0CL84 134 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 STAG3L3P0CL85 134 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 P0DMU3 169 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 FAM231AP0DMU4 169 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 FAM231CP0DMU5 169 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 ATP5G3P48201 142 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 RAB24Q969Q5 203 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 LINC00467Q9BRT7 94 aa14.43□□□□□ -0.1
VTI1B-205ENST00000555543 F5H768 121 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 SERF2P84101 59 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 SSX7Q7RTT5 188 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 C9orf62Q8N4C0 152 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 C11orf72Q8NBR9 251 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 RPH3ALQ9UNE2 315 aa14.42□□□□□ -0.1
VTI1B-205ENST00000555543 TRBV7-9A0A0J9YWB2 115 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 SNURFLB1AK76 121 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 POM121L12Q8N7R1 296 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 RXFP4Q8TDU9 374 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 GSN-AS1Q9NRJ2 163 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 DNAH2Q9P225 4427 aa14.41□□□□□ -0.1
VTI1B-205ENST00000555543 BORCS7-ASMTA0A0B4J1R7 106 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GAGE12BA1L429 117 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 ARPC5O15511 151 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 GAGE7O76087 117 aa14.4□□□□□ -0.1
VTI1B-205ENST00000555543 MBP02144 154 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms