RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MAPK1IP1LQ8NDC0 245 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 ATP6V0BQ99437 205 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 TPPP3Q9BW30 176 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 CENPEQ02224 2701 aa18.64■□□□□ 0.58
TMEM260-207ENST00000555497 TRAV8-2A0A0B4J237 113 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 M0QZ24 198 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 ARL3P36405 182 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 C20orf144Q9BQM9 153 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 TMEM189A5PLL7 270 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 TEX43Q6ZNM6 134 aa18.64■□□□□ 0.57
TMEM260-207ENST00000555497 BTF3P20290 206 aaKnown RBP18.63■□□□□ 0.57
TMEM260-207ENST00000555497 RNASEKQ6P5S7 137 aaKnown RBP18.63■□□□□ 0.57
TMEM260-207ENST00000555497 UNQ9165/PRO28630Q6UXU0 137 aa18.63■□□□□ 0.57
TMEM260-207ENST00000555497 LCNL1Q6ZST4 164 aa18.63■□□□□ 0.57
TMEM260-207ENST00000555497 ZNF575Q86XF7 245 aa18.63■□□□□ 0.57
TMEM260-207ENST00000555497 FBLL1A6NHQ2 334 aaKnown RBP18.62■□□□□ 0.57
TMEM260-207ENST00000555497 IGHV3-11P01762 117 aa18.62■□□□□ 0.57
TMEM260-207ENST00000555497 GATA3P23771 443 aa18.62■□□□□ 0.57
TMEM260-207ENST00000555497 RIGQ13278 110 aa18.62■□□□□ 0.57
TMEM260-207ENST00000555497 ZNF705AQ6ZN79 300 aaPredicted RBP18.62■□□□□ 0.57
TMEM260-207ENST00000555497 SLC50A1Q9BRV3 221 aa18.62■□□□□ 0.57
TMEM260-207ENST00000555497 ZNF25P17030 456 aaPredicted RBP18.61■□□□□ 0.57
TMEM260-207ENST00000555497 LYZL1Q6UWQ5 148 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 LINC01356Q8N9X3 169 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 NDFIP1Q9BT67 221 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 ZANQ9Y493 2812 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 HSBP1O75506 76 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 C3orf79P0CE67 100 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 KRTAP10-9P60411 292 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 C8orf86Q6ZUL3 223 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 GATD1Q8NB37 220 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 MIEN1Q9BRT3 115 aa18.61■□□□□ 0.57
TMEM260-207ENST00000555497 BRI3O95415 125 aa18.6■□□□□ 0.57
TMEM260-207ENST00000555497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.59■□□□□ 0.57
TMEM260-207ENST00000555497 PSMG3-AS1Q96PY0 264 aa18.59■□□□□ 0.57
TMEM260-207ENST00000555497 SMAD7O15105 426 aaKnown RBP18.59■□□□□ 0.57
TMEM260-207ENST00000555497 RPLP1P05386 114 aaKnown RBP18.59■□□□□ 0.57
TMEM260-207ENST00000555497 PF4V1P10720 104 aa18.59■□□□□ 0.57
TMEM260-207ENST00000555497 DEFB112Q30KQ8 113 aa18.59■□□□□ 0.57
TMEM260-207ENST00000555497 Q6AWC8 147 aa18.59■□□□□ 0.57
TMEM260-207ENST00000555497 GLMPQ8WWB7 406 aa18.59■□□□□ 0.57
TMEM260-207ENST00000555497 H3BUA1 57 aa18.58■□□□□ 0.57
TMEM260-207ENST00000555497 PTPN13Q12923 2485 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 EPG5Q9HCE0 2579 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 MUC21A0A0G2JKD1 596 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 MUC21A0A140T8X8 626 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 IGHV4-59P01825 116 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 MUC21Q5SSG8 566 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 USMG5Q96IX5 58 aa18.58■□□□□ 0.56
TMEM260-207ENST00000555497 TMEM213A2RRL7 107 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 RBAKDNA6NC62 111 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 IGLV1-40P01703 118 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 TMEM95Q3KNT9 176 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 IL17RELQ6ZVW7 336 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 AGPAT4-IT1Q9H0P7 198 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 M0R2Z0 102 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 PMCHL1Q16048 86 aa18.57■□□□□ 0.56
TMEM260-207ENST00000555497 TGFAP01135 160 aa18.56■□□□□ 0.56
TMEM260-207ENST00000555497 BMI1P35226 326 aa18.56■□□□□ 0.56
TMEM260-207ENST00000555497 CFHR3Q02985 330 aa18.56■□□□□ 0.56
TMEM260-207ENST00000555497 TMEM208Q9BTX3 173 aa18.56■□□□□ 0.56
TMEM260-207ENST00000555497 NDUFA4O00483 81 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 DLEU1O43261 78 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 ZNF138P52744 262 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 EBLN2Q6P2I7 272 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 OR4X2Q8NGF9 303 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 A0A1B0GW15 77 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 FAM181BA6NEQ2 426 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 GAGE1Q13065 139 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 BORCS7Q96B45 105 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 PAM16Q9Y3D7 125 aa18.55■□□□□ 0.56
TMEM260-207ENST00000555497 RNF223E7ERA6 249 aa18.54■□□□□ 0.56
TMEM260-207ENST00000555497 ZNF493Q6ZR52 646 aa18.54■□□□□ 0.56
TMEM260-207ENST00000555497 GPHB5Q86YW7 130 aa18.54■□□□□ 0.56
TMEM260-207ENST00000555497 VAMP8Q9BV40 100 aa18.54■□□□□ 0.56
TMEM260-207ENST00000555497 C20orf173Q96LM9 149 aa18.53■□□□□ 0.56
TMEM260-207ENST00000555497 PPP1R14DQ9NXH3 145 aa18.53■□□□□ 0.56
TMEM260-207ENST00000555497 FABP5P3A8MUU1 101 aa18.53■□□□□ 0.56
TMEM260-207ENST00000555497 IGLC6P0CF74 106 aa18.53■□□□□ 0.56
TMEM260-207ENST00000555497 MRPL53Q96EL3 112 aaKnown RBP18.53■□□□□ 0.56
TMEM260-207ENST00000555497 CLEC5AQ9NY25 188 aa18.53■□□□□ 0.56
TMEM260-207ENST00000555497 CR1P17927 2039 aa18.52■□□□□ 0.56
TMEM260-207ENST00000555497 ORM1P02763 201 aa18.52■□□□□ 0.56
TMEM260-207ENST00000555497 LINC00614P0C842 121 aa18.52■□□□□ 0.56
TMEM260-207ENST00000555497 GOLT1BQ9Y3E0 138 aa18.52■□□□□ 0.56
TMEM260-207ENST00000555497 C2orf70A6NJV1 201 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 CTRLP40313 264 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 FER1L6-AS1Q8NA97 138 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 CHCHD1Q96BP2 118 aaKnown RBP18.51■□□□□ 0.55
TMEM260-207ENST00000555497 C16orf92Q96LL3 132 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 ABCA12Q86UK0 2595 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 IGHV1-24A0A0C4DH33 117 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 RPS20P60866 119 aaKnown RBP18.51■□□□□ 0.55
TMEM260-207ENST00000555497 CYB5R2Q6BCY4 276 aa18.51■□□□□ 0.55
TMEM260-207ENST00000555497 SRSF2Q01130 221 aaKnown RBP18.5■□□□□ 0.55
TMEM260-207ENST00000555497 J3QLI3 93 aa18.5■□□□□ 0.55
TMEM260-207ENST00000555497 CSN3P07498 182 aa18.5■□□□□ 0.55
TMEM260-207ENST00000555497 AMN1Q8IY45 258 aa18.5■□□□□ 0.55
TMEM260-207ENST00000555497 C11orf21Q9P2W6 132 aa18.5■□□□□ 0.55
TMEM260-207ENST00000555497 LOXL1Q08397 574 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms