RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CSN1S1P47710 185 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 RBX1P62877 108 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 TRAV30A0A087WSZ9 112 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 OOSP1A8MZH6 123 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 IFI27P40305 119 aaPredicted RBP18.43■□□□□ 0.54
STRN3-207ENST00000555358 RHOGP84095 191 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 HIST1H1AQ02539 215 aaPredicted RBP18.43■□□□□ 0.54
STRN3-207ENST00000555358 ERASQ7Z444 233 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 U3KQK5 164 aa18.43■□□□□ 0.54
STRN3-207ENST00000555358 CT45A10P0DMU9 189 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 COX8AP10176 69 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 LOXL1Q08397 574 aaPredicted RBP18.42■□□□□ 0.54
STRN3-207ENST00000555358 VAMP3Q15836 100 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 LYZL1Q6UWQ5 148 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 FANCD2OSQ96PS1 177 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 A0A087X0K7 114 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 F8W735 103 aaPredicted RBP18.42■□□□□ 0.54
STRN3-207ENST00000555358 GNG7O60262 68 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 PLA2G2AP14555 144 aa18.42■□□□□ 0.54
STRN3-207ENST00000555358 IGLV11-55A0A075B6I3 123 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 TMEM213A2RRL7 107 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 D6R8Y8 96 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 NPFFO15130 113 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 FOXE3Q13461 319 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 C2orf91Q6ZV80 131 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 OR4C5Q8NGB2 326 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 AAMDCQ9H7C9 122 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 ZNF48Q96MX3 618 aaPredicted RBP18.41■□□□□ 0.54
STRN3-207ENST00000555358 SIGLEC8Q9NYZ4 499 aa18.41■□□□□ 0.54
STRN3-207ENST00000555358 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.4■□□□□ 0.543e-7■■■■■ 50.1
STRN3-207ENST00000555358 SH2D1AO60880 128 aa18.4■□□□□ 0.54
STRN3-207ENST00000555358 TMSB15BA0A087X1C1 80 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 TMEM189A5PLL7 270 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 DSCR9P59020 149 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 FAM104BQ5XKR9 115 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 COX8CQ7Z4L0 72 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 Q8N6K4 173 aa18.39■□□□□ 0.54
STRN3-207ENST00000555358 SERTM2A0A1B0GWG4 89 aa18.39■□□□□ 0.53
STRN3-207ENST00000555358 OR2T8A6NH00 312 aa18.39■□□□□ 0.53
STRN3-207ENST00000555358 C5orf64Q2M2E5 130 aa18.39■□□□□ 0.53
STRN3-207ENST00000555358 AMN1Q8IY45 258 aa18.39■□□□□ 0.53
STRN3-207ENST00000555358 NAV2Q8IVL1 2488 aa18.39■□□□□ 0.53
STRN3-207ENST00000555358 NCBP2LA6PVI3 153 aaKnown RBP18.38■□□□□ 0.53
STRN3-207ENST00000555358 NPIPB5A8MRT5 1133 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 MSMBP08118 114 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 GPR183P32249 361 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 MFAP4P55083 255 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 EBI3Q14213 229 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 S100A7AQ86SG5 101 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 TRAV40A0A0B4J280 105 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 TMEM11P17152 192 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 PCP4P48539 62 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 HELZ2Q9BYK8 2649 aaKnown RBP18.38■□□□□ 0.53
STRN3-207ENST00000555358 APCP25054 2843 aa18.38■□□□□ 0.53
STRN3-207ENST00000555358 LOC389332A0A1B0GUA5 103 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 CD5LO43866 347 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 HIST2H2BCQ6DN03 193 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 BRD3OSQ6XYD6 125 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 PRELID3AQ96N28 172 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 IGKV2-40A0A087WW87 121 aaPredicted RBP18.37■□□□□ 0.53
STRN3-207ENST00000555358 IGKV2D-40P01614 121 aaPredicted RBP18.37■□□□□ 0.53
STRN3-207ENST00000555358 PSG9Q00887 426 aa18.37■□□□□ 0.53
STRN3-207ENST00000555358 J3QKU1 62 aa18.36■□□□□ 0.53
STRN3-207ENST00000555358 NDPQ00604 133 aa18.36■□□□□ 0.53
STRN3-207ENST00000555358 C21orf62-AS1Q17RA5 79 aa18.36■□□□□ 0.53
STRN3-207ENST00000555358 ORMDL3Q8N138 153 aa18.36■□□□□ 0.53
STRN3-207ENST00000555358 A0A096LNT2 108 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 FGF6P10767 208 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 SLC25A16P16260 332 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 MRPL51Q4U2R6 128 aaKnown RBP18.35■□□□□ 0.53
STRN3-207ENST00000555358 MAPK1IP1LQ8NDC0 245 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 OR8A1Q8NGG7 326 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 DPF1Q92782 380 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 IGHV1-69DA0A0B4J2H0 117 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 CBY3A6NI87 242 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 IGHV1-69P01742 117 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 IGHV4-38-2P0DP08 117 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 PRR25Q96S07 402 aa18.35■□□□□ 0.53
STRN3-207ENST00000555358 ANKRD39Q53RE8 183 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 ZNF562Q6V9R5 426 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 TTC9CQ8N5M4 171 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 ARPC1AQ92747 370 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 HIF1ANQ9NWT6 349 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 C21orf62Q9NYP8 219 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 ZANQ9Y493 2812 aa18.34■□□□□ 0.53
STRN3-207ENST00000555358 EGR2P11161 476 aaPredicted RBP18.34■□□□□ 0.53
STRN3-207ENST00000555358 B4DSR2 109 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 SNAI2O43623 268 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 RPS20P60866 119 aaKnown RBP18.33■□□□□ 0.53
STRN3-207ENST00000555358 LGALS9BQ3B8N2 356 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 SAPCD1Q5SSQ6 148 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 LGALS9CQ6DKI2 356 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 ARL6IP6Q8N6S5 226 aa18.33■□□□□ 0.53
STRN3-207ENST00000555358 CSPG4Q6UVK1 2322 aa18.33■□□□□ 0.52
STRN3-207ENST00000555358 CDKN1BP46527 198 aa18.33■□□□□ 0.52
STRN3-207ENST00000555358 ZNF575Q86XF7 245 aa18.33■□□□□ 0.52
STRN3-207ENST00000555358 RPL7P18124 248 aaKnown RBP18.32■□□□□ 0.52
STRN3-207ENST00000555358 ZNF80P51504 273 aaPredicted RBP18.32■□□□□ 0.52
STRN3-207ENST00000555358 AMMECR1LQ6DCA0 310 aa18.32■□□□□ 0.52
STRN3-207ENST00000555358 AVPP01185 164 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms