RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-219ENST00000555323 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 AMBPP02760 352 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 NMBP08949 121 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-219ENST00000555323 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
SYNE2-219ENST00000555323 ERCC8Q13216 396 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 ATG101Q9BSB4 218 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
SYNE2-219ENST00000555323 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
SYNE2-219ENST00000555323 F6UZH7 168 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-219ENST00000555323 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-219ENST00000555323 CRISP2P16562 243 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 CDKN1BP46527 198 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 ATP5G3P48201 142 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 ZNF138P52744 262 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 GNG5P63218 68 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 IFITM2Q01629 132 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 TMEM78Q5T7P6 136 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 GOLT1AQ6ZVE7 132 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 RNF183Q96D59 192 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 ASCL2Q99929 193 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 GNG13Q9P2W3 67 aa9.25□□□□□ -0.93
SYNE2-219ENST00000555323 K7EQM0 130 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 TSPOP30536 169 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 CYB561D1Q8N8Q1 229 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 SPATA25Q9BR10 227 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 OVOL2Q9BRP0 275 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
SYNE2-219ENST00000555323 KLLNB2CW77 178 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 PEX7O00628 323 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 SPRY2O43597 315 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 IFNA1P01562 189 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 BCL2P10415 239 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 FXYD7P58549 80 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-219ENST00000555323 ZNF767PQ75MW2 155 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 VAX2Q9UIW0 290 aa9.23□□□□□ -0.93
SYNE2-219ENST00000555323 HUWE1Q7Z6Z7 4374 aaKnown RBP9.23□□□□□ -0.93
SYNE2-219ENST00000555323 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 TRBV6-1A0A0K0K1D8 114 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 M0R2Z0 102 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 NDUFS6O75380 124 aaKnown RBP9.22□□□□□ -0.93
SYNE2-219ENST00000555323 LEPP41159 167 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 FLI1Q01543 452 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-219ENST00000555323 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-219ENST00000555323 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 C1orf158Q8N1D5 194 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 ZFAND2AQ8N6M9 145 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 C2CD4CQ8TF44 421 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 TVP23CQ96ET8 276 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 LINC00479Q96M42 142 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 C20orf144Q9BQM9 153 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
SYNE2-219ENST00000555323 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 C11orf52Q96A22 123 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 NEU1Q99519 415 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 RARRES2Q99969 163 aa9.21□□□□□ -0.94
SYNE2-219ENST00000555323 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 PDE6DO43924 150 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-219ENST00000555323 S100A9P06702 114 aaKnown RBP9.2□□□□□ -0.94
SYNE2-219ENST00000555323 ZNF506Q5JVG8 444 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 SAPCD1Q5SSQ6 148 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 Q8TAT8 98 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 PCNPQ8WW12 178 aaKnown RBP9.2□□□□□ -0.94
SYNE2-219ENST00000555323 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 SGK494Q96LW2 274 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 FAM210AQ96ND0 272 aa9.2□□□□□ -0.94
SYNE2-219ENST00000555323 TRAV34A0A0B4J273 112 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 SMIM9A6NGZ8 99 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 INSP01308 110 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 GPX1P07203 203 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
SYNE2-219ENST00000555323 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 RAB14P61106 215 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
SYNE2-219ENST00000555323 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 TMEM256Q8N2U0 113 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 OR11H2Q8NH07 326 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 RETNQ9HD89 108 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 TREM1Q9NP99 234 aa9.19□□□□□ -0.94
SYNE2-219ENST00000555323 ZFP30Q9Y2G7 519 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms