RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 H3BQ15 152 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 RGS13O14921 159 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 CCNKO75909 580 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 ANXA3P12429 323 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 ERCC8Q13216 396 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 LAGE3Q14657 143 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 ZNF846Q147U1 533 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 OR51S1Q8NGJ8 323 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 OR10G4Q8NGN3 311 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 YIPF6Q96EC8 236 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 PRRT1Q99946 306 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 ARPC5LQ9BPX5 153 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 TRAV8-6A0A0B4J262 113 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 LOC100131303A0A0U1RQF7 123 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 K7EPK0 472 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 IGLV2-11P01706 119 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 OR4E1P0C645 316 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 SLC25A6P12236 298 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 NCS1P62166 190 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 SSBP1Q04837 148 aaKnown RBP6.31□□□□□ -1.4
SCFD1-215ENST00000555259 Q6ZQT7 251 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 SH2D6Q7Z4S9 175 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 NHLRC2Q8NBF2 726 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 OR10P1Q8NGE3 313 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 C15orf40Q8WUR7 153 aa6.31□□□□□ -1.4
SCFD1-215ENST00000555259 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
SCFD1-215ENST00000555259 DUXBA0A1W2PPF3 345 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 RBFOX3A6NFN3 312 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 GPX1P07203 203 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 AKAIN1P0CW23 69 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 CRISP2P16562 243 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 OPCMLQ14982 345 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 OR10J3Q5JRS4 329 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 PRR9Q5T870 116 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 MZT2AQ6P582 158 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 TMEM37Q8WXS4 190 aa6.3□□□□□ -1.4
SCFD1-215ENST00000555259 PIGBOS1A0A0B4J2F0 54 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 M0R3E3 92 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 C9orf47Q6ZRZ4 202 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 CLVS1Q8IUQ0 354 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-215ENST00000555259 RASL10AQ92737 203 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 MRPL53Q96EL3 112 aaKnown RBP6.29□□□□□ -1.4
SCFD1-215ENST00000555259 LINC00477Q96M19 166 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 SCGB3A2Q96PL1 93 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 AGPAT4-IT1Q9H0P7 198 aa6.29□□□□□ -1.4
SCFD1-215ENST00000555259 NMBP08949 121 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 VBP1P61758 197 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 RRAS2P62070 204 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-215ENST00000555259 GUK1Q16774 197 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 ZFAND2AQ8N6M9 145 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 Q9H521 79 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 NPVFQ9HCQ7 196 aa6.28□□□□□ -1.4
SCFD1-215ENST00000555259 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 TRAV4A0A0B4J268 109 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 GOSR2O14653 212 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 COX7A2P2O60397 106 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 MRPS10P82664 201 aaKnown RBP6.27□□□□□ -1.41
SCFD1-215ENST00000555259 Q6ZRU5 148 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 ZNF546Q86UE3 836 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 Q8N3U1 123 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 SMIM4Q8WVI0 70 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 SCP2D1Q9UJQ7 156 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 RABL2BQ9UNT1 228 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 FNDC10F2Z333 226 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 ZNF253O75346 499 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 LELP1Q5T871 98 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 C10orf113Q5VZT2 155 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 Q8N976 141 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 AP3S1Q92572 193 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 SRRQ9GZT4 340 aa6.27□□□□□ -1.41
SCFD1-215ENST00000555259 RNF222A6NCQ9 220 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 AGPAT2O15120 278 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
SCFD1-215ENST00000555259 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 OR4C5Q8NGB2 326 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 SPXQ9BT56 116 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 PSENENQ9NZ42 101 aa6.26□□□□□ -1.41
SCFD1-215ENST00000555259 CCDC59Q9P031 241 aaKnown RBP6.26□□□□□ -1.41
SCFD1-215ENST00000555259 TRBV19A0A075B6N1 114 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 IGHV3-16A0A0C4DH30 117 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 ANKRD20A5PA0PJZ0 165 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 METTL15P1P0C7V9 234 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 GATA1P15976 413 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-215ENST00000555259 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCFD1-215ENST00000555259 TMEM128Q5BJH2 165 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 TMEM78Q5T7P6 136 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 RAB2BQ8WUD1 216 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 PAXXQ9BUH6 204 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 FUNDC2Q9BWH2 189 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms