RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BAGE2Q86Y30 109 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 ESM1Q9NQ30 184 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 TRAV8-1A0A0A6YYK1 113 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 ZNF705FA8MVS1 300 aaPredicted RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 K7ERU9 68 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 M0R3E3 92 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 IBA57Q5T440 356 aaKnown RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 OR5B12Q96R08 314 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 GNB4Q9HAV0 340 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 PTPN13Q12923 2485 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 A0A0G2JLM5 398 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 SERTM2A0A1B0GWG4 89 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 PF4V1P10720 104 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 HLA-DMBP28068 263 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 CRIP1P50238 77 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 GOLT1AQ6ZVE7 132 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 TCF24Q7RTU0 167 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 FRMD6-AS1P0C7T7 363 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 EDN2P20800 178 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 RPEL1Q2QD12 228 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 ZC2HC1AQ96GY0 325 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 METTL26Q96S19 204 aa6.78□□□□□ -1.32
TDP1-210ENST00000554976 DNAJC9-AS1A6NH13 148 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 UBE2G1P62253 170 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 CT83Q5H943 113 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 TEX29Q8N6K0 151 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
TDP1-210ENST00000554976 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 NPFFR1Q9GZQ6 430 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 PEF1Q9UBV8 284 aaKnown RBP6.77□□□□□ -1.33
TDP1-210ENST00000554976 SPG11Q96JI7 2443 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 RBAKDNA6NC62 111 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 K7EMT4 169 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 CHEK1O14757 476 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 ELANEP08246 267 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 ABCA1O95477 2261 aa6.77□□□□□ -1.33
TDP1-210ENST00000554976 OR8I2Q8N0Y5 310 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 IGHV3-66A0A0C4DH42 116 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 IGHV7-4-1A0A0J9YVY3 117 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 PRAC2D3DTV9 90 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 ZNF207O43670 478 aaKnown RBP6.76□□□□□ -1.33
TDP1-210ENST00000554976 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
TDP1-210ENST00000554976 IGFL4Q6B9Z1 124 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 OR4B1Q8NGF8 309 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 SLC50A1Q9BRV3 221 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 A0A1B0GXF2 115 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 CA1P00915 261 aaPredicted RBP6.76□□□□□ -1.33
TDP1-210ENST00000554976 LGALS1P09382 135 aaKnown RBP6.76□□□□□ -1.33
TDP1-210ENST00000554976 GTSF1Q8WW33 167 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 C8orf49Q96NF6 230 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
TDP1-210ENST00000554976 IGKV2-40A0A087WW87 121 aaPredicted RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 IZUMO1RA6ND01 250 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 LGALS9O00182 355 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 IGKV2D-40P01614 121 aaPredicted RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 FOXA3P55318 350 aaPredicted RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 Q6ZSV7 163 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 PRNTQ86SH4 94 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 TSKUQ8WUA8 353 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 ASCL2Q99929 193 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 VGLL1Q99990 258 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 HELZ2Q9BYK8 2649 aaKnown RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 FBLL1A6NHQ2 334 aaKnown RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 SCGB1A1P11684 91 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 TDRG1Q3Y452 100 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 RPP21Q9H633 154 aaKnown RBP6.75□□□□□ -1.33
TDP1-210ENST00000554976 CLEC5AQ9NY25 188 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 UQCR10Q9UDW1 63 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
TDP1-210ENST00000554976 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 SCGB2A2Q13296 93 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 PRR27Q6MZM9 219 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 FAM19A4Q96LR4 140 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 PRR25Q96S07 402 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 IGHV3-49A0A0A0MS15 119 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms