RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 HBE1P02100 147 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 NMBP08949 121 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 ERCC8Q13216 396 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 CMTM2Q8TAZ6 248 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 FAM19A4Q96LR4 140 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 TMEM208Q9BTX3 173 aa17.47■□□□□ 0.39
SDR39U1-209ENST00000554947 IGKV2-40A0A087WW87 121 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-209ENST00000554947 A0A1B0GVG6 124 aa17.46■□□□□ 0.39
SDR39U1-209ENST00000554947 IGKV2D-40P01614 121 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-209ENST00000554947 DPPA3Q6W0C5 159 aa17.46■□□□□ 0.39
SDR39U1-209ENST00000554947 CSMD3Q7Z407 3707 aa17.46■□□□□ 0.39
SDR39U1-209ENST00000554947 DEFB4AO15263 64 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 CRISP2P16562 243 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 RRN3P1Q2M238 152 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 C11orf45Q8TAV5 145 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 VGLL1Q99990 258 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 ZNF492Q9P255 531 aa17.45■□□□□ 0.38
SDR39U1-209ENST00000554947 A0A1W2PRE2 83 aa17.44■□□□□ 0.38
SDR39U1-209ENST00000554947 EIF5AL1Q6IS14 154 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-209ENST00000554947 TMED6Q8WW62 240 aa17.44■□□□□ 0.38
SDR39U1-209ENST00000554947 LENEPQ9Y5L5 61 aa17.44■□□□□ 0.38
SDR39U1-209ENST00000554947 SERTM2A0A1B0GWG4 89 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 MAP1LC3B2A6NCE7 125 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 KLLNB2CW77 178 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 ZNF138P52744 262 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 ZFP69Q49AA0 526 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 GFI1BQ5VTD9 330 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 C5orf17Q8NAS9 161 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 MAP1LC3BQ9GZQ8 125 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 PLA2G2EQ9NZK7 142 aa17.43■□□□□ 0.38
SDR39U1-209ENST00000554947 H7BYZ3 331 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 TAS2R60P59551 318 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 CD300CQ08708 224 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 ZFAND6Q6FIF0 208 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 SLC51BQ86UW2 128 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 LINC01587Q99440 93 aa17.42■□□□□ 0.38
SDR39U1-209ENST00000554947 KIR3DS1Q14943 382 aa17.41■□□□□ 0.38
SDR39U1-209ENST00000554947 IQCF2Q8IXL9 164 aa17.41■□□□□ 0.38
SDR39U1-209ENST00000554947 MBD3L1Q8WWY6 194 aa17.41■□□□□ 0.38
SDR39U1-209ENST00000554947 NKX6-2Q9C056 277 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-209ENST00000554947 TEX48A0A1B0GUV7 120 aa17.4■□□□□ 0.38
SDR39U1-209ENST00000554947 LOC102723971A0A1B0GUV8 181 aa17.4■□□□□ 0.38
SDR39U1-209ENST00000554947 C9orf62Q8N4C0 152 aa17.4■□□□□ 0.38
SDR39U1-209ENST00000554947 C7orf71A4D174 169 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 CXorf65A6NEN9 183 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 FHITP49789 147 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 RAB5CP51148 216 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 FGF8P55075 233 aaPredicted RBP17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 ZFAND2AQ8N6M9 145 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 FAM213BQ8TBF2 198 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 NIPSNAP3BQ9BS92 247 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 TMPRSS5Q9H3S3 457 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 ARL2-SNX15V9GYD0 113 aa17.39■□□□□ 0.37
SDR39U1-209ENST00000554947 NUPR2A6NF83 97 aa17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 GGTLC3B5MD39 225 aa17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 GPX1P07203 203 aa17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 NANOS2P60321 138 aaKnown RBP17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 SUMO1P63165 101 aaKnown RBP17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 GOLT1AQ6ZVE7 132 aa17.38■□□□□ 0.37
SDR39U1-209ENST00000554947 STARD9Q9P2P6 4700 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 ZNF705GA8MUZ8 300 aaPredicted RBP17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 K7EQM0 130 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 TCRAP04437 139 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 SPART-AS1P0CW21 52 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 ZNF493Q6ZR52 646 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 PYGO2Q9BRQ0 406 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 EPDR1Q9UM22 224 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 RPH3ALQ9UNE2 315 aa17.37■□□□□ 0.37
SDR39U1-209ENST00000554947 TRAV12-3A0A0B4J271 114 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 J3KRW8 73 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 PMS2P11Q13670 270 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 Q8TAT8 98 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 C16orf74Q96GX8 76 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 LINC00467Q9BRT7 94 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 CELA1Q9UNI1 258 aa17.36■□□□□ 0.37
SDR39U1-209ENST00000554947 FBLL1A6NHQ2 334 aaKnown RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 FAM74A7A6NL05 159 aa17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 C11orf94C9JXX5 98 aa17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 ZNF324O75467 553 aaPredicted RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 GNG5P63218 68 aa17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 CEMP1Q6PRD7 247 aaPredicted RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 TMEM263Q8WUH6 116 aaKnown RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 SFT2D1Q8WV19 159 aa17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 PHLDA1Q8WV24 401 aaPredicted RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 DKK2Q9UBU2 259 aa17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 YTHDF2Q9Y5A9 579 aaKnown RBP17.35■□□□□ 0.37
SDR39U1-209ENST00000554947 H2AFB1P0C5Y9 115 aa17.34■□□□□ 0.37
SDR39U1-209ENST00000554947 RNASE4P34096 147 aaKnown RBP17.34■□□□□ 0.37
SDR39U1-209ENST00000554947 SULT1A2P50226 295 aa17.34■□□□□ 0.37
SDR39U1-209ENST00000554947 TCEAL7Q9BRU2 100 aa17.34■□□□□ 0.37
SDR39U1-209ENST00000554947 ATG101Q9BSB4 218 aa17.34■□□□□ 0.37
SDR39U1-209ENST00000554947 AZU1P20160 251 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 EMP1P54849 157 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 UBE2G2P60604 165 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 BTN1A1Q13410 526 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 CCDC28AQ8IWP9 274 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 RNASE8Q8TDE3 154 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-209ENST00000554947 PLAC8L1A1L4L8 177 aa17.32■□□□□ 0.36
SDR39U1-209ENST00000554947 LYRM9A8MSI8 78 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms