RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 AMTNQ6UX39 209 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 VAX2Q9UIW0 290 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 PEX7O00628 323 aa12.07□□□□□ -0.48
SPTLC2-203ENST00000554901 GOLT1AQ6ZVE7 132 aa12.07□□□□□ -0.48
SPTLC2-203ENST00000554901 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
SPTLC2-203ENST00000554901 AGRNO00468 2067 aa12.07□□□□□ -0.48
SPTLC2-203ENST00000554901 PDE6DO43924 150 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 IGKV3-20P01619 116 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 TSPOP30536 169 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 GNG5P63218 68 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 VGLL1Q99990 258 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 B9D2Q9BPU9 175 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 ZNF492Q9P255 531 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 RPH3ALQ9UNE2 315 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 RBFOX3A6NFN3 312 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 ATP6V1G1O75348 118 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 ZNF138P52744 262 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 HAGHQ16775 308 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 Q6ZWC4 215 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 TMEM75Q8N9X5 138 aa12.06□□□□□ -0.48
SPTLC2-203ENST00000554901 RGS13O14921 159 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 S100A9P06702 114 aaKnown RBP12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 CT45A10P0DMU9 189 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 LEPP41159 167 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 ERCC8Q13216 396 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 KLF12Q9Y4X4 402 aa12.05□□□□□ -0.48
SPTLC2-203ENST00000554901 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
SPTLC2-203ENST00000554901 CRISP2P16562 243 aa12.04□□□□□ -0.48
SPTLC2-203ENST00000554901 CDKN1BP46527 198 aa12.04□□□□□ -0.48
SPTLC2-203ENST00000554901 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
SPTLC2-203ENST00000554901 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
SPTLC2-203ENST00000554901 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 GIG44P09565 113 aaPredicted RBP12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 FLI1Q01543 452 aaPredicted RBP12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 TP53TG1Q9Y2A0 90 aa12.03□□□□□ -0.48
SPTLC2-203ENST00000554901 IGLV2-11P01706 119 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 PRB4P10163 310 aaPredicted RBP12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 AKR1C3P42330 323 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 C2CD4CQ8TF44 421 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 IGF2BP2-AS1Q96M15 143 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 C20orf144Q9BQM9 153 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 EIF5A2Q9GZV4 153 aaKnown RBP12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 SMDT1Q9H4I9 107 aa12.02□□□□□ -0.48
SPTLC2-203ENST00000554901 TRAV8-1A0A0A6YYK1 113 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 UBE2G1P62253 170 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 TMEM183BQ1AE95 376 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 SPINK13Q1W4C9 94 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 RARRES2Q99969 163 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 PSG8Q9UQ74 426 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 KLLNB2CW77 178 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 M0R2Z0 102 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 Q8TAT8 98 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 SPATA25Q9BR10 227 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 TM2D3Q9BRN9 247 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 ZFP30Q9Y2G7 519 aa12.01□□□□□ -0.49
SPTLC2-203ENST00000554901 CRXO43186 299 aaPredicted RBP12□□□□□ -0.49
SPTLC2-203ENST00000554901 INSP01308 110 aa12□□□□□ -0.49
SPTLC2-203ENST00000554901 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
SPTLC2-203ENST00000554901 RNF183Q96D59 192 aa12□□□□□ -0.49
SPTLC2-203ENST00000554901 LINC00479Q96M42 142 aa12□□□□□ -0.49
SPTLC2-203ENST00000554901 RCHY1Q96PM5 261 aa12□□□□□ -0.49
SPTLC2-203ENST00000554901 GPX1P07203 203 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 FXYD7P58549 80 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 TAS2R60P59551 318 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 TMEM256Q8N2U0 113 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 TREM1Q9NP99 234 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 MED9Q9NWA0 146 aa11.99□□□□□ -0.49
SPTLC2-203ENST00000554901 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 PEA15Q15121 130 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 PRNTQ86SH4 94 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 Q86TA4 180 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 GOLT1BQ9Y3E0 138 aa11.98□□□□□ -0.49
SPTLC2-203ENST00000554901 C7orf71A4D174 169 aa11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 RAB19A4D1S5 217 aa11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 SPRY2O43597 315 aa11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 LTAP01374 205 aa11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 RPL35P42766 123 aaKnown RBP11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 GFI1BQ5VTD9 330 aa11.97□□□□□ -0.49
SPTLC2-203ENST00000554901 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms