RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MPV17L2Q567V2 206 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 Q6AWC8 147 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 SIGLEC8Q9NYZ4 499 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 WFDC3Q8IUB2 231 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 EBI3Q14213 229 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 MRPL51Q4U2R6 128 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 Q5PR19 223 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 FAM104BQ5XKR9 115 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
ARHGEF40-203ENST00000554514 A0A1B0GW15 77 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 CKS2P33552 79 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 GAGE1Q13065 139 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 ZNF747Q9BV97 191 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 NUDT3O95989 172 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 ORMDL3Q8N138 153 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
ARHGEF40-203ENST00000554514 UBE2E1P51965 193 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 FAM110DQ8TAY7 271 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 IL17RELQ6ZVW7 336 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 AJUBAQ96IF1 538 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 C19orf84I3L1E1 186 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 EFNA4P52798 201 aa12.14□□□□□ -0.47
ARHGEF40-203ENST00000554514 A0A087X0K7 114 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 A6NJY4 79 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 GOSR1O95249 250 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 NPYP01303 97 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 ZNF493Q6ZR52 646 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 A0A096LNJ9 63 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 CBY3A6NI87 242 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 BMI1P35226 326 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
ARHGEF40-203ENST00000554514 ITPR1Q14643 2758 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 BUB3O43684 328 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 FOXE3Q13461 319 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 SCRT2Q9NQ03 307 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 LMO4P61968 165 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 NHLH1Q02575 133 aa12.12□□□□□ -0.47
ARHGEF40-203ENST00000554514 J3KRW8 73 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 NPFFO15130 113 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 EVI2AP22794 236 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 COX11Q9Y6N1 276 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 PRSS57Q6UWY2 283 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 SELENOKQ9Y6D0 94 aa12.11□□□□□ -0.47
ARHGEF40-203ENST00000554514 CACNG7P62955 275 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 CENPVL3A0A0U1RRI6 287 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 CCL25O15444 150 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 Q6ZQT7 251 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 TMEM190Q8WZ59 177 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF40-203ENST00000554514 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 EEF1AKMT3Q96AZ1 226 aa12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 GNLYP22749 145 aa12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 RPS20P60866 119 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 TMEM95Q3KNT9 176 aa12.09□□□□□ -0.47
ARHGEF40-203ENST00000554514 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 METTL26Q96S19 204 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 AGPAT4-IT1Q9H0P7 198 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 U3KQK5 164 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 VAMP3Q15836 100 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 LY6EQ16553 131 aa12.08□□□□□ -0.48
ARHGEF40-203ENST00000554514 HBDP02042 147 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 BVES-AS1Q5T3Y7 98 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 C5orf56Q8N8D9 126 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 ITLN2Q8WWU7 325 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 ABCA2Q9BZC7 2435 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 C11orf21Q9P2W6 132 aa12.07□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 TMEM78Q5T7P6 136 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 MS4A6AQ9H2W1 248 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGKV3-7A0A075B6H7 116 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 CDKN1BP46527 198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms