RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 BOKQ9UMX3 212 aaPredicted RBP1.16□□□□□ -2.22
SRP54-204ENST00000553923 NOP16Q9Y3C1 178 aaKnown RBP1.16□□□□□ -2.22
SRP54-204ENST00000553923 COL1A2P08123 1366 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 DOCK6Q96HP0 2047 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SVILO95425 2214 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 CACNA1SQ13698 1873 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 ZNF638Q14966 1978 aaKnown RBP1.16□□□□□ -2.22
SRP54-204ENST00000553923 NAIPQ13075 1403 aa1.15□□□□□ -2.22
SRP54-204ENST00000553923 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.22
SRP54-204ENST00000553923 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
SRP54-204ENST00000553923 ARHGEF28Q8N1W1 1705 aaKnown RBP1.15□□□□□ -2.22
SRP54-204ENST00000553923 WDR90Q96KV7 1748 aa1.15□□□□□ -2.22
SRP54-204ENST00000553923 NUP205Q92621 2012 aa1.15□□□□□ -2.22
SRP54-204ENST00000553923 TRAV17A0A0B4J275 112 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 SPAARA0A1B0GVQ0 90 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 F8W1H4 67 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 CORTO00230 105 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 SNCGO76070 127 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 P0C880 135 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 SMIM6P0DI80 62 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 CXCL8P10145 99 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 RBP2P50120 134 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 MIR22HGQ0VDD5 57 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 TPRXLQ17RH7 258 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 IQCJQ1A5X6 159 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 Q1T7F1 81 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 C3orf62Q6ZUJ4 267 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 Q6ZUT4 128 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 GTF2H5Q6ZYL4 71 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 FP248Q71RG6 208 aaPredicted RBP1.15□□□□□ -2.23
SRP54-204ENST00000553923 FAM19A2Q8N3H0 131 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 Q8TAT8 98 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 COPS9Q8WXC6 57 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 PSMF1Q92530 271 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 C14orf144Q96I85 54 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 TXNDC17Q9BRA2 123 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 TTTY12Q9BZ98 90 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 RERGLQ9H628 205 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 TAS2R8Q9NYW2 309 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 COL1A1P02452 1464 aaPredicted RBP1.15□□□□□ -2.23
SRP54-204ENST00000553923 ADGBQ8N7X0 1667 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 N4BP2Q86UW6 1770 aaPredicted RBP1.15□□□□□ -2.23
SRP54-204ENST00000553923 KIF26AQ9ULI4 1882 aaPredicted RBP1.15□□□□□ -2.23
SRP54-204ENST00000553923 THADAQ6YHU6 1953 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 LCTP09848 1927 aa1.15□□□□□ -2.23
SRP54-204ENST00000553923 COL27A1Q8IZC6 1860 aaPredicted RBP1.14□□□□□ -2.23
SRP54-204ENST00000553923 KDM5CP41229 1560 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 TRAV12-2A0A075B6T6 113 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 TRBV6-8A0A0A6YYG3 113 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 IFITM5A6NNB3 132 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 CCDC179H3BU77 68 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 J3QLW9 94 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 HYPMO75409 117 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 IL5P05113 134 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 IGKV4-1P06312 121 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 IL7P13232 177 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 CCL4P13236 92 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 GNG4P50150 75 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 TPPP2P59282 170 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 PPP3R1P63098 170 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 C1orf137Q5JT78 98 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 FAM74A1Q5RGS3 127 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 RPL7L1Q6DKI1 246 aaKnown RBP1.14□□□□□ -2.23
SRP54-204ENST00000553923 LINC00269Q8N2A0 174 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 PLPP5Q8NEB5 264 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 PP6455Q8WZ26 134 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 DPH3Q96FX2 82 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 MPC1Q9Y5U8 109 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 PLXND1Q9Y4D7 1925 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 ATG2BQ96BY7 2078 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 RGS12O14924 1447 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 ARHGAP31Q2M1Z3 1444 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 FGD6Q6ZV73 1430 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 CCDC88AQ3V6T2 1871 aa1.14□□□□□ -2.23
SRP54-204ENST00000553923 SMARCA2P51531 1590 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 FRMPD1Q5SYB0 1578 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 UHRF1BP1LA0JNW5 1464 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 GRIN2AQ12879 1464 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 A6NIN4 97 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 H3BRM9 83 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 M0R2P5 195 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 DNAL4O96015 105 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 TFF1P04155 84 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 PDE6HQ13956 83 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 HCP5Q6MZN7 132 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 MRPL54Q6P161 138 aaKnown RBP1.13□□□□□ -2.23
SRP54-204ENST00000553923 UNQ5815/PRO19632Q6UWF5 114 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 BRD3OSQ6XYD6 125 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 ATP11AUNQ6ZP68 121 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 FOXI2Q6ZQN5 318 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 ZCCHC23Q6ZST2 131 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 ATP6V0E2Q8NHE4 81 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 SPACA4Q8TDM5 124 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 C4orf3Q8WVX3 66 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 SPTSSAQ969W0 71 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 PPP3R2Q96LZ3 170 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 AGPAT4-IT1Q9H0P7 198 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 NAA60Q9H7X0 242 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 CDC42SE1Q9NRR8 79 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms