RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 G3V318 75 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 SYNJ2BPP57105 145 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR20EP86478 221 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR20CP86479 221 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR20DP86480 221 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR20BP86481 221 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR20AP86496 221 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 THAP8Q8NA92 274 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGHV2-70P01814 119 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 LCNL1Q6ZST4 164 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 KLHL30-AS1Q8NEE0 82 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 RASL10AQ92737 203 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 PRR25Q96S07 402 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 MSMBP08118 114 aa12.24□□□□□ -0.45
ARHGEF40-202ENST00000553709 C10orf142B7Z368 130 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 DKK1O94907 266 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGHV3-53P01767 116 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 ESDP10768 282 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 SNHG12Q9BXW3 62 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 CRPP02741 224 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGHV1-69DA0A0B4J2H0 117 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGHV1-69P01742 117 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 PCNX1Q96RV3 2341 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
ARHGEF40-202ENST00000553709 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 Q8N8P6 123 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 SP5Q6BEB4 398 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 KAAG1Q9UBP8 84 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 A0A087WX48 190 aa12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 FGF23Q9GZV9 251 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF40-202ENST00000553709 ABCA4P78363 2273 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 PCNX2A6NKB5 2137 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 GATA3P23771 443 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 LYPD6Q86Y78 171 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 UBE2E2Q96LR5 201 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 Q6ZSR3 168 aa12.21□□□□□ -0.45
ARHGEF40-202ENST00000553709 GAGE12BA1L429 117 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 DEFB131AP59861 70 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 TMEM131Q92545 1883 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 TCF15Q12870 199 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 VWC2Q2TAL6 325 aa12.21□□□□□ -0.46
ARHGEF40-202ENST00000553709 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 KRTAP27-1Q3LI81 207 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 C1QTNF4Q9BXJ3 329 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 ZC2HC1AQ96GY0 325 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 SPXQ9BT56 116 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
ARHGEF40-202ENST00000553709 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 PAX4O43316 350 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 K7EM74 188 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 K7EN84 100 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
ARHGEF40-202ENST00000553709 NPSP0C0P6 89 aa12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 C8orf31Q8N9H6 132 aa12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 NDUFA4O00483 81 aa12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 SSBP2P81877 361 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF40-202ENST00000553709 DOCK10Q96BY6 2186 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 IGLL1P15814 213 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 J3QKU1 62 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 ASPHD1Q5U4P2 390 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 C2orf82Q6UX34 121 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 SIGLEC8Q9NYZ4 499 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 GAGE2BQ13066 116 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 GAGE2EQ4V326 116 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 GAGE2DQ9UEU5 116 aa12.17□□□□□ -0.46
ARHGEF40-202ENST00000553709 ZNF491Q8N8L2 437 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 TMEM141Q96I45 108 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 IGLC7A0M8Q6 106 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 LTAP01374 205 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 LGALS9BQ3B8N2 356 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 LGALS9CQ6DKI2 356 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
ARHGEF40-202ENST00000553709 SPRY4Q9C004 299 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms