RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 TRBV19A0A075B6N1 114 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 NDUFB4O95168 129 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
SIX1-202ENST00000553535 SULT1A1P50225 295 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 Q6ZTI0 123 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 TMEM252Q8N6L7 170 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 LYRM2Q9NU23 88 aaPredicted RBP8.6□□□□□ -1.03
SIX1-202ENST00000553535 NUDT15Q9NV35 164 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 TMEM14CQ9P0S9 112 aa8.6□□□□□ -1.03
SIX1-202ENST00000553535 IGSF23A1L1A6 192 aa8.59□□□□□ -1.03
SIX1-202ENST00000553535 M0R3E3 92 aa8.59□□□□□ -1.03
SIX1-202ENST00000553535 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
SIX1-202ENST00000553535 SLC25A5P05141 298 aaKnown RBP8.59□□□□□ -1.03
SIX1-202ENST00000553535 HIST1H1EP10412 219 aaKnown RBP8.59□□□□□ -1.03
SIX1-202ENST00000553535 ERCC8Q13216 396 aa8.59□□□□□ -1.03
SIX1-202ENST00000553535 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
SIX1-202ENST00000553535 Q9H3A6 140 aa8.59□□□□□ -1.03
SIX1-202ENST00000553535 UBE2L5PA0A1B0GUS4 154 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 C7orf71A4D174 169 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 KLLNB2CW77 178 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 H2AFB2P0C5Z0 115 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 BAXQ07812 192 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 RAB32Q13637 225 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 ATP6V1FQ16864 119 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 C11orf72Q8NBR9 251 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 C18orf15Q96N68 181 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
SIX1-202ENST00000553535 FGF7P21781 194 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 S100A10P60903 97 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 HBG1P69891 147 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 HBG2P69892 147 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 CD300CQ08708 224 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 PDE6HQ13956 83 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 TTC32Q5I0X7 151 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 GSN-AS1Q9NRJ2 163 aa8.57□□□□□ -1.04
SIX1-202ENST00000553535 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
SIX1-202ENST00000553535 A0A1W2PPQ1 181 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 PYYP10082 97 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 GCSAMLQ5JQS6 135 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 STX12Q86Y82 276 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 TIMM9Q9Y5J7 89 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 A0A096LPF7 62 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 MPDU1O75352 247 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 CRISP2P16562 243 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 BTF3P20290 206 aaKnown RBP8.56□□□□□ -1.04
SIX1-202ENST00000553535 BTN1A1Q13410 526 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 EXOC3-AS1Q8N2X6 119 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
SIX1-202ENST00000553535 CCDC32Q9BV29 185 aa8.56□□□□□ -1.04
SIX1-202ENST00000553535 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 NMBP08949 121 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 RNASE4P34096 147 aaKnown RBP8.55□□□□□ -1.04
SIX1-202ENST00000553535 NHLH2Q02577 135 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 BLNKQ8WV28 456 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 FAM167A-AS1Q96KT0 104 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 NPCDR1Q9BY65 106 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 GPN1Q9HCN4 374 aaPredicted RBP8.55□□□□□ -1.04
SIX1-202ENST00000553535 NDUFA13Q9P0J0 144 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
SIX1-202ENST00000553535 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 SPINK4O60575 86 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 GPX1P07203 203 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 TCL1AP56279 114 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 ICAM4Q14773 271 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 VGLL1Q99990 258 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 FUT9Q9Y231 359 aa8.54□□□□□ -1.04
SIX1-202ENST00000553535 IGKV2-40A0A087WW87 121 aaPredicted RBP8.53□□□□□ -1.04
SIX1-202ENST00000553535 IGKV2D-40P01614 121 aaPredicted RBP8.53□□□□□ -1.04
SIX1-202ENST00000553535 NBEAP1P0C6P0 100 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 IBA57Q5T440 356 aaKnown RBP8.53□□□□□ -1.04
SIX1-202ENST00000553535 PRR9Q5T870 116 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 Q6ZQT7 251 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 MIR17HGQ75NE6 70 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 AAMDCQ9H7C9 122 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 ZNF492Q9P255 531 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
SIX1-202ENST00000553535 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.04
SIX1-202ENST00000553535 OR5C1Q8NGR4 320 aa8.52□□□□□ -1.04
SIX1-202ENST00000553535 THAP6Q8TBB0 222 aa8.52□□□□□ -1.04
SIX1-202ENST00000553535 OR51M1Q9H341 326 aa8.52□□□□□ -1.04
SIX1-202ENST00000553535 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
SIX1-202ENST00000553535 TMEM78Q5T7P6 136 aa8.52□□□□□ -1.05
SIX1-202ENST00000553535 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms