RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FABP5P3A8MUU1 101 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 CD5LO43866 347 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 ID1P41134 155 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF138P52744 262 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 TCL1AP56279 114 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 HIST1H1AQ02539 215 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-221ENST00000553498 TMEM78Q5T7P6 136 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 MAPK1IP1LQ8NDC0 245 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 C16orf92Q96LL3 132 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 LINC00477Q96M19 166 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF702PQ9H963 129 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 NRN1Q9NPD7 142 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 SMPXQ9UHP9 88 aa5.58□□□□□ -1.52
ATXN3-221ENST00000553498 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-221ENST00000553498 TRAV8-2A0A0B4J237 113 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3-35A0A0C4DH35 117 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 A0A1B0GUT8 65 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 TMEM189A5PLL7 270 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 IFITM10A6NMD0 228 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 F2Z2F3 143 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 CA1P00915 261 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-221ENST00000553498 RAB4BP61018 213 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 KLF5Q13887 457 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-221ENST00000553498 MRPL54Q6P161 138 aaKnown RBP5.57□□□□□ -1.52
ATXN3-221ENST00000553498 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-221ENST00000553498 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 WFDC11Q8NEX6 87 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 SGK494Q96LW2 274 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 RHPN1-AS1Q9BWJ2 59 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 GPR61Q9BZJ8 451 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 FLNCQ14315 2725 aa5.57□□□□□ -1.52
ATXN3-221ENST00000553498 FBN2P35556 2912 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 CACNA1BQ00975 2339 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 IGKV2-40A0A087WW87 121 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-221ENST00000553498 M0QZ24 198 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 SOCS3O14543 225 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 SH2D1AO60880 128 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 IGKV2D-40P01614 121 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-221ENST00000553498 TRBV12-3P01733 135 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 APOHP02749 345 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-221ENST00000553498 FABP4P15090 132 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 CRIP1P50238 77 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 UNQ9165/PRO28630Q6UXU0 137 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF493Q6ZR52 646 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 BAGE3Q86Y29 109 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 SIGLECL1Q8N7X8 197 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 OR10D4PQ8NGN7 298 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 OR10J6PQ8NGY7 276 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
ATXN3-221ENST00000553498 TNCP24821 2201 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 MYO18BQ8IUG5 2567 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3OR16-8A0A075B7F1 116 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 TRAV2A0A0B4J234 112 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 AMBPP02760 352 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 RAB4AP20338 218 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 CTRLP40313 264 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 SLURP1P55000 103 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-221ENST00000553498 GFI1BQ5VTD9 330 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 TCF24Q7RTU0 167 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 ODF3Q96PU9 254 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 VGLL1Q99990 258 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
ATXN3-221ENST00000553498 DOCK11Q5JSL3 2073 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3-66A0A0C4DH42 116 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF705FA8MVS1 300 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF207O43670 478 aaKnown RBP5.54□□□□□ -1.52
ATXN3-221ENST00000553498 SPINK4O60575 86 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 IGLC6P0CF74 106 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 PMCHP20382 165 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 SRIP30626 198 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 CAMPP49913 170 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 SNRPD3P62318 126 aaKnown RBP5.54□□□□□ -1.52
ATXN3-221ENST00000553498 SLAQ13239 276 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 APRG1Q8IVJ8 170 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 ZNF738Q8NE65 137 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 C4orf3Q8WVX3 66 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
ATXN3-221ENST00000553498 KCNS1Q96KK3 526 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 C8orf49Q96NF6 230 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 ALKBH7Q9BT30 221 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-221ENST00000553498 AGPAT4-IT1Q9H0P7 198 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 PEMTQ9UBM1 199 aa5.54□□□□□ -1.52
ATXN3-221ENST00000553498 SPTBN1Q01082 2364 aaKnown RBP5.53□□□□□ -1.52
ATXN3-221ENST00000553498 TACC2O95359 2948 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3OR16-13A0A075B7E8 117 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 LOC102724200A0A096LPH7 203 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-221ENST00000553498 IGHV3-74A0A0B4J1X5 117 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 TRAV21A0A0B4J279 112 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 TMEM213A2RRL7 107 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 SERF1AO75920 110 aa5.53□□□□□ -1.52
ATXN3-221ENST00000553498 HLA-DMBP28068 263 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms