RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 C9orf47Q6ZRZ4 202 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 OR10G8Q8NGN5 311 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 WNK1Q9H4A3 2382 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-206ENST00000553447 H7BYZ3 331 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 SAP30O75446 220 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 ERVFC1-1P60608 527 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 SAPCD1Q5SSQ6 148 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 Q8TAT8 98 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 PRR25Q96S07 402 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 OSTCQ9NRP0 149 aa13.17□□□□□ -0.3
PSEN1-206ENST00000553447 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF138P52744 262 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 DEFB1P60022 68 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 TMEM78Q5T7P6 136 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 FAM231DQ6ZW35 169 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-206ENST00000553447 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 RNASE7Q9H1E1 156 aaKnown RBP13.16□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
PSEN1-206ENST00000553447 CXorf65A6NEN9 183 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 F6UB75 175 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-206ENST00000553447 IBA57Q5T440 356 aaKnown RBP13.15□□□□□ -0.3
PSEN1-206ENST00000553447 COX8CQ7Z4L0 72 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 GPR61Q9BZJ8 451 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
PSEN1-206ENST00000553447 TEP1Q99973 2627 aaKnown RBP13.15□□□□□ -0.3
PSEN1-206ENST00000553447 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PSEN1-206ENST00000553447 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
PSEN1-206ENST00000553447 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
PSEN1-206ENST00000553447 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-206ENST00000553447 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-206ENST00000553447 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
PSEN1-206ENST00000553447 V9GYV3 84 aa13.14□□□□□ -0.31
PSEN1-206ENST00000553447 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
PSEN1-206ENST00000553447 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
PSEN1-206ENST00000553447 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
PSEN1-206ENST00000553447 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
PSEN1-206ENST00000553447 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-206ENST00000553447 JMJD1CQ15652 2540 aa13.12□□□□□ -0.31
PSEN1-206ENST00000553447 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
PSEN1-206ENST00000553447 CT45A10P0DMU9 189 aa13.12□□□□□ -0.31
PSEN1-206ENST00000553447 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
PSEN1-206ENST00000553447 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-206ENST00000553447 YPEL4Q96NS1 127 aa13.12□□□□□ -0.31
PSEN1-206ENST00000553447 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
PSEN1-206ENST00000553447 A0A0J9YX75 114 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-206ENST00000553447 CRIP1P50238 77 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 GDF5OSQ5U4N7 250 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 TMEM158Q8WZ71 300 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
PSEN1-206ENST00000553447 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
PSEN1-206ENST00000553447 SAV1Q9H4B6 383 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-206ENST00000553447 P01737 135 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 PFN1P07737 140 aaKnown RBP13.1□□□□□ -0.31
PSEN1-206ENST00000553447 DEFB131AP59861 70 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 C3orf56Q8N813 242 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 IL36BQ9NZH7 164 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 URGCP-MRPS24S4R325 110 aa13.1□□□□□ -0.31
PSEN1-206ENST00000553447 NIPBLQ6KC79 2804 aaeCLIP13.09□□□□□ -0.31
PSEN1-206ENST00000553447 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 COLCA2A8K830 154 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 CD33P20138 364 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 S100PP25815 95 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-206ENST00000553447 ELOBQ15370 118 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 FAM162BQ5T6X4 162 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
PSEN1-206ENST00000553447 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
PSEN1-206ENST00000553447 SH2D1AO60880 128 aa13.08□□□□□ -0.32
PSEN1-206ENST00000553447 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
PSEN1-206ENST00000553447 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.32
PSEN1-206ENST00000553447 SHISA2Q6UWI4 295 aa13.08□□□□□ -0.32
PSEN1-206ENST00000553447 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.32
PSEN1-206ENST00000553447 MAST4O15021 2626 aa13.08□□□□□ -0.32
PSEN1-206ENST00000553447 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-206ENST00000553447 CRISP2P16562 243 aa13.07□□□□□ -0.32
PSEN1-206ENST00000553447 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
PSEN1-206ENST00000553447 CT83Q5H943 113 aa13.07□□□□□ -0.32
PSEN1-206ENST00000553447 C9orf66Q5T8R8 295 aa13.07□□□□□ -0.32
PSEN1-206ENST00000553447 ZFAND2AQ8N6M9 145 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms