RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 DEFA1P59665 94 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 DEFA3P59666 94 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 FAM122CQ6P4D5 195 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 LINC00612Q8N6U2 182 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 PPP1R1CQ8WVI7 109 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 AGPAT4-IT1Q9H0P7 198 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 FAT2Q9NYQ8 4349 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 IGKV2-40A0A087WW87 121 aaPredicted RBP13.64□□□□□ -0.23
IFT43-204ENST00000553338 IGKV2D-40P01614 121 aaPredicted RBP13.64□□□□□ -0.23
IFT43-204ENST00000553338 NBEAP1P0C6P0 100 aa13.64□□□□□ -0.23
IFT43-204ENST00000553338 CCL18P55774 89 aa13.64□□□□□ -0.23
IFT43-204ENST00000553338 BTN1A1Q13410 526 aa13.64□□□□□ -0.23
IFT43-204ENST00000553338 C1orf134Q5TEV5 83 aa13.64□□□□□ -0.23
IFT43-204ENST00000553338 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
IFT43-204ENST00000553338 MRPL32Q9BYC8 188 aaKnown RBP13.64□□□□□ -0.23
IFT43-204ENST00000553338 OR10J4P0C629 311 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 PET100P0DJ07 73 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 M6PRP20645 277 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 RNASE4P34096 147 aaKnown RBP13.63□□□□□ -0.23
IFT43-204ENST00000553338 CD300CQ08708 224 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 TMEM78Q5T7P6 136 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 GNPNAT1Q96EK6 184 aaPredicted RBP13.63□□□□□ -0.23
IFT43-204ENST00000553338 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 ATP5SQ99766 215 aa13.63□□□□□ -0.23
IFT43-204ENST00000553338 TRAV26-1A0A087WT03 109 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 A0A0J9YY99 117 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 KLLNB2CW77 178 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 GPX1P07203 203 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 DAZ2Q13117 558 aaKnown RBP13.62□□□□□ -0.23
IFT43-204ENST00000553338 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 ZNF680Q8NEM1 530 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 ZNRF2Q8NHG8 242 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 FUT9Q9Y231 359 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 LINC00588Q9Y4M8 146 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 HSPB11Q9Y547 144 aa13.62□□□□□ -0.23
IFT43-204ENST00000553338 OR7C2O60412 319 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 MPC2O95563 127 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 HOXA5P20719 270 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 Q6ZTI0 123 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 SSX7Q7RTT5 188 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 EIF4E3Q8N5X7 224 aaKnown RBP13.61□□□□□ -0.23
IFT43-204ENST00000553338 FXYD5Q96DB9 178 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 VGLL1Q99990 258 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 TMPRSS5Q9H3S3 457 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 GSN-AS1Q9NRJ2 163 aa13.61□□□□□ -0.23
IFT43-204ENST00000553338 DNAH17Q9UFH2 4485 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 NBDYA0A0U1RRE5 68 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
IFT43-204ENST00000553338 CRISP2P16562 243 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 FFAR4Q5NUL3 377 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 SCGB1C1Q8TD33 95 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 PHYHIPLQ96FC7 376 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 SMIM3Q9BZL3 60 aa13.6□□□□□ -0.23
IFT43-204ENST00000553338 HERC2O95714 4834 aa13.59□□□□□ -0.23
IFT43-204ENST00000553338 TRGV2A0A075B6R0 118 aa13.59□□□□□ -0.23
IFT43-204ENST00000553338 IFNA5P01569 189 aa13.59□□□□□ -0.23
IFT43-204ENST00000553338 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
IFT43-204ENST00000553338 C11orf72Q8NBR9 251 aa13.59□□□□□ -0.23
IFT43-204ENST00000553338 LINC00467Q9BRT7 94 aa13.59□□□□□ -0.23
IFT43-204ENST00000553338 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 RGS13O14921 159 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 NMBP08949 121 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 CSN1S1P47710 185 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 UBE2L3P68036 154 aaKnown RBP13.58□□□□□ -0.24
IFT43-204ENST00000553338 ANXA2RQ3ZCQ2 193 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 PRR9Q5T870 116 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 ZFAND2AQ8N6M9 145 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 ZNF492Q9P255 531 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 MBD2Q9UBB5 411 aa13.58□□□□□ -0.24
IFT43-204ENST00000553338 ZNF138P52744 262 aa13.57□□□□□ -0.24
IFT43-204ENST00000553338 RANP62826 216 aaKnown RBP13.57□□□□□ -0.24
IFT43-204ENST00000553338 Q8TAT8 98 aa13.57□□□□□ -0.24
IFT43-204ENST00000553338 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
IFT43-204ENST00000553338 TAS2R45P59539 299 aa13.56□□□□□ -0.24
IFT43-204ENST00000553338 KHDC3LQ587J8 217 aa13.56□□□□□ -0.24
IFT43-204ENST00000553338 Q9H3A6 140 aa13.56□□□□□ -0.24
IFT43-204ENST00000553338 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
IFT43-204ENST00000553338 H3BNG1 76 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 TCL1AP56279 114 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 Q6ZQT7 251 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 ARPC5LQ9BPX5 153 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 TP53TG3Q9ULZ0 132 aa13.55□□□□□ -0.24
IFT43-204ENST00000553338 IGHV1OR15-1A0A075B7D0 117 aa13.54□□□□□ -0.24
IFT43-204ENST00000553338 SPINK4O60575 86 aa13.54□□□□□ -0.24
IFT43-204ENST00000553338 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
IFT43-204ENST00000553338 IBA57Q5T440 356 aaKnown RBP13.54□□□□□ -0.24
IFT43-204ENST00000553338 Q9H8V8 135 aa13.54□□□□□ -0.24
IFT43-204ENST00000553338 KIAA1109Q2LD37 5005 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 RBAKDNA6NC62 111 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 EIF3GO75821 320 aaKnown RBP eCLIP13.53□□□□□ -0.24
IFT43-204ENST00000553338 ESRGQ1W209 222 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 HYLS1Q96M11 299 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 WFDC1Q9HC57 220 aa13.53□□□□□ -0.24
IFT43-204ENST00000553338 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.25
IFT43-204ENST00000553338 TNP2Q05952 138 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms