RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 DCSTAMPQ9H295 470 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 NOP10Q9NPE3 64 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 MRPS16Q9Y3D3 137 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 GOLT1BQ9Y3E0 138 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 HLA-DRB4X5D2U9 266 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TNXBP22105 4242 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 LOC100130705A0A1B0GUX0 176 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 MEIS3P1A6NDR6 274 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM235A6NFC5 223 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 SMIM9A6NGZ8 99 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 SNTNA6NMZ2 147 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF701M0R085 212 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 LECT2O14960 151 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 CYB5BO43169 146 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 CRXO43186 299 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 HPRT1P00492 218 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OXTP01178 125 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ATP5G1P05496 136 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 CDK1P06493 297 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TLX1NBP0CAT3 122 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 NQO2P16083 231 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 HIST1H1DP16402 221 aaKnown RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 MYL12AP19105 171 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TAGLN2P37802 199 aaKnown RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 LPAR6P43657 344 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ATP5G3P48201 142 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TAS2R31P59538 309 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 RPS25P62851 125 aaKnown RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 PSG9Q00887 426 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ST3GAL4Q11206 333 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 WFDC2Q14508 124 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 CDNFQ49AH0 187 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 KRTAP13-2Q52LG2 175 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 HSD17B12Q53GQ0 312 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 LELP1Q5T871 98 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OGFRL1Q5TC84 451 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 AADACL3Q5VUY0 350 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TTC23Q5W5X9 447 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM91Q6ZNR0 172 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 SCXQ7RTU7 201 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OR4C16Q8NGL9 310 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OR10R2Q8NGX6 335 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OR2G3Q8NGZ4 309 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 OR1P1Q8NH06 330 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 GPR146Q96CH1 333 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 CENPNQ96H22 339 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 HSD17B10Q99714 261 aaKnown RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 RBKSQ9H477 322 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 SAV1Q9H4B6 383 aaPredicted RBP2.35□□□□□ -2.03
ATXN3-217ENST00000553287 ORC6Q9Y5N6 252 aa2.35□□□□□ -2.03
ATXN3-217ENST00000553287 LYRM9A8MSI8 78 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 SIVA1O15304 175 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 IGKV1-39P01597 117 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 IGKV1D-39P04432 117 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 IL4P05112 153 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 M6PRP20645 277 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 GNRHRP30968 328 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 SNRPD3P62318 126 aaKnown RBP2.34□□□□□ -2.03
ATXN3-217ENST00000553287 LAIR2Q6ISS4 152 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 AMTNQ6UX39 209 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 AHSA2Q719I0 299 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 TMED4Q7Z7H5 227 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 WFDC10BQ8IUB3 73 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 LGALS14Q8TCE9 139 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 RXFP4Q8TDU9 374 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM70Q9BUB7 260 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 PARD6GQ9BYG4 376 aaPredicted RBP2.34□□□□□ -2.03
ATXN3-217ENST00000553287 ATG5Q9H1Y0 275 aa2.34□□□□□ -2.03
ATXN3-217ENST00000553287 A0A0J9YX75 114 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 MYL12BO14950 172 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 SNAPC5O75971 98 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 PPYP01298 95 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 UCHL1P09936 223 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 ETV6P41212 452 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 FABP5Q01469 135 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 POU2AF1Q16633 256 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 HACD4Q5VWC8 232 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 CNIH2Q6PI25 160 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 Q8N814 137 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 COQ8AQ8NI60 647 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 IGF2BP2-AS1Q96M15 143 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 TMEM56Q96MV1 263 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 LINC01587Q99440 93 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 PBDC1Q9BVG4 233 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 ANXA10Q9UJ72 324 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 RAB22AQ9UL26 194 aa2.33□□□□□ -2.04
ATXN3-217ENST00000553287 EFCAB10A6NFE3 127 aa2.32□□□□□ -2.04
ATXN3-217ENST00000553287 RBFOX2O43251 390 aaKnown RBP eCLIP2.32□□□□□ -2.04
ATXN3-217ENST00000553287 PSCAO43653 123 aa2.32□□□□□ -2.04
ATXN3-217ENST00000553287 PGLYRP1O75594 196 aaPredicted RBP2.32□□□□□ -2.04
ATXN3-217ENST00000553287 SLC22A5O76082 557 aa2.32□□□□□ -2.04
ATXN3-217ENST00000553287 GNAO1P09471 354 aa2.32□□□□□ -2.04
ATXN3-217ENST00000553287 HSMCR30P0CW71 290 aa2.32□□□□□ -2.04
ATXN3-217ENST00000553287 RNASE2P10153 161 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms