RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 CT45A10P0DMU9 189 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 FAM74A1Q5RGS3 127 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 ARL6IP6Q8N6S5 226 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 TMEM208Q9BTX3 173 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 TMEM167BQ9NRX6 74 aa8.45□□□□□ -1.06
TRAFD1-209ENST00000552896 UMAD1C9J7I0 102 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 HBE1P02100 147 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 TPT1P13693 172 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 RXFP4Q8TDU9 374 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 FAM19A4Q96LR4 140 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 HYLS1Q96M11 299 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 LYSTQ99698 3801 aa8.44□□□□□ -1.06
TRAFD1-209ENST00000552896 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 CXorf65A6NEN9 183 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 NUPR2A6NF83 97 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 NMBP08949 121 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 CRISP2P16562 243 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 ERCC8Q13216 396 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 RRN3P1Q2M238 152 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 GFI1BQ5VTD9 330 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 CMTM2Q8TAZ6 248 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 VGLL1Q99990 258 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 MAP1LC3BQ9GZQ8 125 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 AGPAT4-IT1Q9H0P7 198 aa8.43□□□□□ -1.06
TRAFD1-209ENST00000552896 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 LOC102723971A0A1B0GUV8 181 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 PGPA6NDG6 321 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 KLLNB2CW77 178 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 DIRC3C9JPN6 131 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 H7BYZ3 331 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 PMS2P11Q13670 270 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 DPPA3Q6W0C5 159 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 LINC00528Q8N1L1 170 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 C5orf17Q8NAS9 161 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 TMED6Q8WW62 240 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 ZNF492Q9P255 531 aa8.42□□□□□ -1.06
TRAFD1-209ENST00000552896 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 A0A1B0GVG6 124 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 SERTM2A0A1B0GWG4 89 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 A0A1W2PRE2 83 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 C7orf71A4D174 169 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 GGTLC3B5MD39 225 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 ZNF138P52744 262 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 TAS2R60P59551 318 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 NANOS2P60321 138 aaKnown RBP8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 KIR3DS1Q14943 382 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 ZFP69Q49AA0 526 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 Q8TAT8 98 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 PLECQ15149 4684 aaKnown RBP8.41□□□□□ -1.06
TRAFD1-209ENST00000552896 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 FHITP49789 147 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 CD300CQ08708 224 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 C9orf62Q8N4C0 152 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 C16orf74Q96GX8 76 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 LINC01587Q99440 93 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 YTHDF2Q9Y5A9 579 aaKnown RBP8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 ARL2-SNX15V9GYD0 113 aa8.4□□□□□ -1.06
TRAFD1-209ENST00000552896 TRAV12-3A0A0B4J271 114 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 J3KRW8 73 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 K7EQM0 130 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 TCRAP04437 139 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 GPX1P07203 203 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 SPART-AS1P0CW21 52 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 GNG5P63218 68 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 BTN1A1Q13410 526 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 FAM213BQ8TBF2 198 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 TMEM263Q8WUH6 116 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 PHLDA1Q8WV24 401 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 NKX6-2Q9C056 277 aaPredicted RBP8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
TRAFD1-209ENST00000552896 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms