RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 NUPR1O60356 82 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 EDF1O60869 148 aaKnown RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 TCRAP04437 139 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 PAEPP09466 180 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 SLC25A4P12235 298 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 COX7CP15954 63 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 EFNA4P52798 201 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 FXYD4P59646 89 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 MAXP61244 160 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 PCBD1P61457 104 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 SNRPD3P62318 126 aaKnown RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 BLCAPP62952 87 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 QRFPP83859 136 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 OCIAD2Q56VL3 154 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 TMEM244Q5VVB8 128 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 CSAG1Q6PB30 78 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 HAGHLQ6PII5 290 aaPredicted RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 CASC2Q6XLA1 102 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 FOXI2Q6ZQN5 318 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 C3orf62Q6ZUJ4 267 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 TAC4Q86UU9 113 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 PRR15Q8IV56 129 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 TMEM229BQ8NBD8 167 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 NUP35Q8NFH5 326 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 OR4B1Q8NGF8 309 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 OR51A4Q8NGJ6 313 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 OR10AC1Q8NH08 325 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 ZNF431Q8TF32 576 aaPredicted RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 THEM6Q8WUY1 208 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 C4orf3Q8WVX3 66 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 AMELYQ99218 206 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 MRPL57Q9BQC6 102 aaKnown RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 CYSTM1Q9H1C7 97 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 BANF2Q9H503 90 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 RNF122Q9H9V4 155 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 COMMD3Q9UBI1 195 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 LAMTOR3Q9UHA4 124 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 SMPXQ9UHP9 88 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 GINS2Q9Y248 185 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 MED31Q9Y3C7 131 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 CACNA1HO95180 2353 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 ZNF106Q9H2Y7 1883 aaKnown RBP0.28□□□□□ -2.36
TGFBR1-210ENST00000552573 REV3LO60673 3130 aa0.28□□□□□ -2.37
TGFBR1-210ENST00000552573 ATG2BQ96BY7 2078 aa0.28□□□□□ -2.37
TGFBR1-210ENST00000552573 HMCN2Q8NDA2 5059 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CEP250Q9BV73 2442 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 LAMB4A4D0S4 1761 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 MTORP42345 2549 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 TAF1LQ8IZX4 1826 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 STAB2Q8WWQ8 2551 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 MYO5AQ9Y4I1 1855 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 IGHV1-24A0A0C4DH33 117 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 TRBV27A0A0K0K1C4 114 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 J3KT08 172 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 DEGS1O15121 323 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 INE1O15225 51 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 ARPC5O15511 151 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 TRACP01848 142 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 HBDP02042 147 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 SLC25A5P05141 298 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CKS2P33552 79 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 GTF2A1P52655 376 aaPredicted RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 RPL37AP61513 92 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 MRPS36P82909 103 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 TFAMQ00059 246 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 OR8B8Q15620 311 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 KRTAP20-1Q3LI63 56 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 SPATA45Q537H7 98 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 HSD17B12Q53GQ0 312 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CLLU1Q5K131 121 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 KRTAP26-1Q6PEX3 210 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 PHF5AQ7RTV0 110 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 OR8I2Q8N0Y5 310 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 OR5AS1Q8N127 324 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 LINC00269Q8N2A0 174 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 OR9Q1Q8NGQ5 310 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 OTOSQ8NHW6 89 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 LZICQ8WZA0 190 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 PSMF1Q92530 271 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 DIRC1Q969H9 104 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 SMIM7Q9BQ49 75 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 AIF1LQ9BQI0 150 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 SMIM3Q9BZL3 60 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 LPAR5Q9H1C0 372 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CENPHQ9H3R5 247 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 BATF3Q9NR55 127 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 BOKQ9UMX3 212 aaPredicted RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 COL6A6A6NMZ7 2263 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 ROCK1Q13464 1354 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 ANKRD30AQ9BXX3 1397 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 FGD6Q6ZV73 1430 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 YTHDC2Q9H6S0 1430 aaKnown RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 EP300Q09472 2414 aaPredicted RBP0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CAMSAP2Q08AD1 1489 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CECR2Q9BXF3 1484 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 CEP290O15078 2479 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 DLC1Q96QB1 1528 aa0.27□□□□□ -2.37
TGFBR1-210ENST00000552573 UBR5O95071 2799 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms