RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CR1P17927 2039 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 TSTD3H0UI37 97 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 FSHBP01225 129 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 ZNF664Q8N3J9 261 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
RAB3IP-216ENST00000552199 TMSB15BA0A087X1C1 80 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 PMCHP20382 165 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 Q5PR19 223 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 CTAG1AP78358 180 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 BORCS7Q96B45 105 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 NPFFR1Q9GZQ6 430 aa10.72□□□□□ -0.69
RAB3IP-216ENST00000552199 POLQO75417 2590 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 TMEM95Q3KNT9 176 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 FAM209BQ5JX69 171 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 C9orf139Q6ZV77 190 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 FAM19A2Q8N3H0 131 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 AGPAT4-IT1Q9H0P7 198 aa10.71□□□□□ -0.69
RAB3IP-216ENST00000552199 TENM4Q6N022 2769 aa10.71□□□□□ -0.7
RAB3IP-216ENST00000552199 CENPEQ02224 2701 aa10.71□□□□□ -0.7
RAB3IP-216ENST00000552199 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 FABP5P3A8MUU1 101 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 NIT1Q86X76 327 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 RNF114Q9Y508 228 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 PSMB8P28062 276 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 Q6YL49 198 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 IL17RELQ6ZVW7 336 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 URB1-AS1Q96HZ7 61 aa10.7□□□□□ -0.7
RAB3IP-216ENST00000552199 CSMD2Q7Z408 3487 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 TMEM89A2RUT3 159 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 HSBP1O75506 76 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 NTF3P20783 257 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 DDTP30046 118 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 ZNF138P52744 262 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 KRTDAPP60985 99 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 ZNF493Q6ZR52 646 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 GPHB5Q86YW7 130 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 PEF1Q9UBV8 284 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 PTPN13Q12923 2485 aa10.69□□□□□ -0.7
RAB3IP-216ENST00000552199 Q96MF0 132 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 ORM1P02763 201 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 IGLC6P0CF74 106 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 CTRLP40313 264 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 TEX43Q6ZNM6 134 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 C20orf173Q96LM9 149 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
RAB3IP-216ENST00000552199 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 SOCS3O14543 225 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 DEFA6Q01524 100 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 TM4SF20Q53R12 229 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 PRSS57Q6UWY2 283 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 Q8N976 141 aa10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 CHCHD1Q96BP2 118 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 HELZ2Q9BYK8 2649 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-216ENST00000552199 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 M0R2Z0 102 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 C3orf79P0CE67 100 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 KRTAP1-3Q8IUG1 177 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 K7EMT4 169 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 M0QZ24 198 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 CYB5R2Q6BCY4 276 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 C10orf99Q6UWK7 81 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
RAB3IP-216ENST00000552199 ZANQ9Y493 2812 aa10.65□□□□□ -0.7
RAB3IP-216ENST00000552199 LINC00614P0C842 121 aa10.65□□□□□ -0.7
RAB3IP-216ENST00000552199 SSTP61278 116 aa10.65□□□□□ -0.7
RAB3IP-216ENST00000552199 MUC21A0A0G2JKD1 596 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 KIR2DL5BA0A0G2JN68 375 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 KIR2DL5BA0A0G2JPC4 375 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 MUC21A0A140T8X8 626 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 FAM181BA6NEQ2 426 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 OVOL1O14753 267 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 HOXA3O43365 443 aaPredicted RBP10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 TDRG1Q3Y452 100 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms