RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 ZNF471Q9BX82 626 aaPredicted RBP12.51□□□□□ -0.41
CDK4-208ENST00000551706 OTORQ9NRC9 128 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 TMEM167BQ9NRX6 74 aa12.51□□□□□ -0.41
CDK4-208ENST00000551706 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 DEFB4AO15263 64 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 C9orf47Q6ZRZ4 202 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 BAP18Q8IXM2 172 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
CDK4-208ENST00000551706 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
CDK4-208ENST00000551706 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 GCHFRP30047 84 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 CMTM2Q8TAZ6 248 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 SUN5Q8TC36 379 aa12.49□□□□□ -0.41
CDK4-208ENST00000551706 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
CDK4-208ENST00000551706 RBAKDNA6NC62 111 aa12.48□□□□□ -0.41
CDK4-208ENST00000551706 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
CDK4-208ENST00000551706 UMAD1C9J7I0 102 aa12.48□□□□□ -0.41
CDK4-208ENST00000551706 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
CDK4-208ENST00000551706 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
CDK4-208ENST00000551706 PGPA6NDG6 321 aa12.47□□□□□ -0.41
CDK4-208ENST00000551706 NMBP08949 121 aa12.47□□□□□ -0.41
CDK4-208ENST00000551706 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
CDK4-208ENST00000551706 ERCC8Q13216 396 aa12.47□□□□□ -0.41
CDK4-208ENST00000551706 LINC01587Q99440 93 aa12.47□□□□□ -0.41
CDK4-208ENST00000551706 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 LOC102723971A0A1B0GUV8 181 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 NUPR2A6NF83 97 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 H7BYZ3 331 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 PMS2P11Q13670 270 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 ZNF726P1Q15940 193 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 LGALSLQ3ZCW2 172 aaPredicted RBP12.46□□□□□ -0.41
CDK4-208ENST00000551706 GFI1BQ5VTD9 330 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 STOML3Q8TAV4 291 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 VGLL1Q99990 258 aa12.46□□□□□ -0.41
CDK4-208ENST00000551706 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 CRISP2P16562 243 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 ZNF138P52744 262 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 TAS2R60P59551 318 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 EIF5AL1Q6IS14 154 aaKnown RBP12.45□□□□□ -0.42
CDK4-208ENST00000551706 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 ZNF492Q9P255 531 aa12.45□□□□□ -0.42
CDK4-208ENST00000551706 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 MAP1LC3B2A6NCE7 125 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 KLLNB2CW77 178 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
CDK4-208ENST00000551706 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 TMED6Q8WW62 240 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 NIPSNAP3BQ9BS92 247 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 MAP1LC3BQ9GZQ8 125 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 LENEPQ9Y5L5 61 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 HECTD4Q9Y4D8 3996 aa12.44□□□□□ -0.42
CDK4-208ENST00000551706 C7orf71A4D174 169 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 J3KRW8 73 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 GPX1P07203 203 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
CDK4-208ENST00000551706 EMP1P54849 157 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 KIR3DS1Q14943 382 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 C5orf17Q8NAS9 161 aa12.43□□□□□ -0.42
CDK4-208ENST00000551706 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
CDK4-208ENST00000551706 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
CDK4-208ENST00000551706 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
CDK4-208ENST00000551706 C11orf94C9JXX5 98 aa12.42□□□□□ -0.42
CDK4-208ENST00000551706 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
CDK4-208ENST00000551706 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
CDK4-208ENST00000551706 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
CDK4-208ENST00000551706 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
CDK4-208ENST00000551706 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
CDK4-208ENST00000551706 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
CDK4-208ENST00000551706 K7EQM0 130 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 HTN1P15515 57 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
CDK4-208ENST00000551706 SUMO1P63165 101 aaKnown RBP12.41□□□□□ -0.42
CDK4-208ENST00000551706 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 ZFAND2AQ8N6M9 145 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 Q8TAT8 98 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 C16orf74Q96GX8 76 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
CDK4-208ENST00000551706 YTHDF2Q9Y5A9 579 aaKnown RBP12.41□□□□□ -0.42
CDK4-208ENST00000551706 RNASE4P34096 147 aaKnown RBP12.4□□□□□ -0.42
CDK4-208ENST00000551706 FHITP49789 147 aa12.4□□□□□ -0.42
CDK4-208ENST00000551706 TMEM263Q8WUH6 116 aaKnown RBP12.4□□□□□ -0.42
CDK4-208ENST00000551706 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
CDK4-208ENST00000551706 GGTLC3B5MD39 225 aa12.39□□□□□ -0.43
CDK4-208ENST00000551706 TCRAP04437 139 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms