RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 GBGT1Q8N5D6 347 aa10.71□□□□□ -0.69
LETMD1-229ENST00000551261 RNF182Q8N6D2 247 aa10.71□□□□□ -0.69
LETMD1-229ENST00000551261 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
LETMD1-229ENST00000551261 ODF3Q96PU9 254 aa10.71□□□□□ -0.69
LETMD1-229ENST00000551261 NF1P21359 2839 aa10.71□□□□□ -0.7
LETMD1-229ENST00000551261 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-229ENST00000551261 TRAV8-1A0A0A6YYK1 113 aa10.7□□□□□ -0.7
LETMD1-229ENST00000551261 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
LETMD1-229ENST00000551261 DEFB114Q30KQ6 69 aa10.7□□□□□ -0.7
LETMD1-229ENST00000551261 CBLN2Q8IUK8 224 aa10.7□□□□□ -0.7
LETMD1-229ENST00000551261 DAZAP1Q96EP5 407 aaKnown RBP10.7□□□□□ -0.7
LETMD1-229ENST00000551261 PRR25Q96S07 402 aa10.7□□□□□ -0.7
LETMD1-229ENST00000551261 DUSP14O95147 198 aaKnown RBP10.69□□□□□ -0.7
LETMD1-229ENST00000551261 EDN2P20800 178 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 HLA-DMBP28068 263 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 KRTAP10-3P60369 221 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 TMEM61Q8N0U2 210 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 OR8A1Q8NGG7 326 aa10.69□□□□□ -0.7
LETMD1-229ENST00000551261 C19orf71A6NCJ1 209 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 FAM231BA6NCW3 169 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 ZNF705FA8MVS1 300 aaPredicted RBP10.68□□□□□ -0.7
LETMD1-229ENST00000551261 P01737 135 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 SRSF2Q01130 221 aaKnown RBP10.68□□□□□ -0.7
LETMD1-229ENST00000551261 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 IGFL4Q6B9Z1 124 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 FOXI2Q6ZQN5 318 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
LETMD1-229ENST00000551261 IL36BQ9NZH7 164 aa10.68□□□□□ -0.7
LETMD1-229ENST00000551261 IGKV3-7A0A075B6H7 116 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 TRBV24-1A0A075B6N3 115 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 GATCO43716 136 aaKnown RBP10.67□□□□□ -0.7
LETMD1-229ENST00000551261 SAP30O75446 220 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 C20orf173Q96LM9 149 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 ASCL2Q99929 193 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 VGLL1Q99990 258 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 SAV1Q9H4B6 383 aaPredicted RBP10.67□□□□□ -0.7
LETMD1-229ENST00000551261 RPP21Q9H633 154 aaKnown RBP10.67□□□□□ -0.7
LETMD1-229ENST00000551261 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
LETMD1-229ENST00000551261 V9GYV3 84 aa10.67□□□□□ -0.7
LETMD1-229ENST00000551261 ZNF705GA8MUZ8 300 aaPredicted RBP10.66□□□□□ -0.7
LETMD1-229ENST00000551261 A8MWL6 223 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 IGLV1-51P01701 117 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 ZNF688P0C7X2 276 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 CRISP2P16562 243 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
LETMD1-229ENST00000551261 OR5I1Q13606 314 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 KRTAP24-1Q3LI83 254 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
LETMD1-229ENST00000551261 Q6AWC8 147 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 PRR27Q6MZM9 219 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 NHLRC2Q8NBF2 726 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 ZC2HC1AQ96GY0 325 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
LETMD1-229ENST00000551261 A0A0J9YX75 114 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
LETMD1-229ENST00000551261 TSPOP30536 169 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 TFPI2P48307 235 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.7
LETMD1-229ENST00000551261 ELOBQ15370 118 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 COX19Q49B96 90 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 SHISA2Q6UWI4 295 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 TSKUQ8WUA8 353 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 YPEL4Q96NS1 127 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 CLUHP3Q96NS8 147 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
LETMD1-229ENST00000551261 RNASE7Q9H1E1 156 aaKnown RBP10.65□□□□□ -0.7
LETMD1-229ENST00000551261 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 LEPP41159 167 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 Q8TAT8 98 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 PYGO2Q9BRQ0 406 aa10.64□□□□□ -0.71
LETMD1-229ENST00000551261 SMIM27A0A1W2PRY6 76 aa10.63□□□□□ -0.71
LETMD1-229ENST00000551261 A8MTW9 85 aa10.63□□□□□ -0.71
LETMD1-229ENST00000551261 CXCL1P09341 107 aa10.63□□□□□ -0.71
LETMD1-229ENST00000551261 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
LETMD1-229ENST00000551261 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-229ENST00000551261 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-229ENST00000551261 COLCA2A8K830 154 aa10.62□□□□□ -0.71
LETMD1-229ENST00000551261 TYMSP04818 313 aa10.62□□□□□ -0.71
LETMD1-229ENST00000551261 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
LETMD1-229ENST00000551261 ERCC8Q13216 396 aa10.62□□□□□ -0.71
LETMD1-229ENST00000551261 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
LETMD1-229ENST00000551261 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms