RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RBM38Q9H0Z9 239 aaKnown RBP8.82□□□□□ -1
PTCH1-221ENST00000550914 C11orf1Q9H5F2 150 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 GSN-AS1Q9NRJ2 163 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 FUT9Q9Y231 359 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 TRGV1A0A0A0MS02 117 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 EREGO14944 169 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 CST7O76096 145 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
PTCH1-221ENST00000550914 CRISP2P16562 243 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 BCAP31P51572 246 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 CAV2P51636 162 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 TCL1AP56279 114 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 SLAQ13239 276 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 ST6GAL2Q96JF0 529 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 PTTG2Q9NZH5 202 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 LSM5Q9Y4Y9 91 aaKnown RBP8.81□□□□□ -1
PTCH1-221ENST00000550914 ICOSQ9Y6W8 199 aa8.81□□□□□ -1
PTCH1-221ENST00000550914 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 M0R3E3 92 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 MPDU1O75352 247 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 NDUFB4O95168 129 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 IL7P13232 177 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
PTCH1-221ENST00000550914 S100A11P31949 105 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 SULT1A1P50225 295 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 HBG1P69891 147 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 HBG2P69892 147 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 ERCC8Q13216 396 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 AGPAT4-IT1Q9H0P7 198 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 PRO0255Q9UI72 69 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 TIMM9Q9Y5J7 89 aa8.8□□□□□ -1
PTCH1-221ENST00000550914 FAM24AA6NFZ4 105 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 EPM2AB3EWF7 344 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 K7EP13 123 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 CCSO14618 274 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 PAX4O43316 350 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 NXPH4O95158 308 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 GPX1P07203 203 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
PTCH1-221ENST00000550914 ERVFC1-1P60608 527 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 CD300CQ08708 224 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 BTN1A1Q13410 526 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 ATP6V1FQ16864 119 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 NFE4Q86UQ8 179 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 VGLL1Q99990 258 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 LYRM2Q9NU23 88 aaPredicted RBP8.79□□□□□ -1
PTCH1-221ENST00000550914 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
PTCH1-221ENST00000550914 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 UBE2L5PA0A1B0GUS4 154 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 C5orf51A6NDU8 294 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 FAM25EA8MYX2 175 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 RGS13O14921 159 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 BAXQ07812 192 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 STX12Q86Y82 276 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 C2orf50Q96LR7 162 aa8.78□□□□□ -1
PTCH1-221ENST00000550914 IGHV1OR15-1A0A075B7D0 117 aa8.77□□□□□ -1.01
PTCH1-221ENST00000550914 CRYBA4P53673 196 aa8.77□□□□□ -1.01
PTCH1-221ENST00000550914 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1.01
PTCH1-221ENST00000550914 LYPD1Q8N2G4 141 aa8.77□□□□□ -1.01
PTCH1-221ENST00000550914 TMEM252Q8N6L7 170 aa8.77□□□□□ -1.01
PTCH1-221ENST00000550914 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
PTCH1-221ENST00000550914 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 IGSF23A1L1A6 192 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 PLA2G10O15496 165 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 LYRM1O43325 122 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 TCRBP04435 133 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 PYYP10082 97 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 FGF7P21781 194 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 IL15RAQ13261 267 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 EXOC3-AS1Q8N2X6 119 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 BLNKQ8WV28 456 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 ARPC5LQ9BPX5 153 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 ZNF492Q9P255 531 aa8.76□□□□□ -1.01
PTCH1-221ENST00000550914 XGP55808 180 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 S100A10P60903 97 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 ZNF415Q09FC8 603 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 FHL2Q14192 279 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 ICAM4Q14773 271 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 PRR9Q5T870 116 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 IQCF2Q8IXL9 164 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 SLC25A2Q9BXI2 301 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 NPCDR1Q9BY65 106 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 MRPL32Q9BYC8 188 aaKnown RBP8.75□□□□□ -1.01
PTCH1-221ENST00000550914 NUDT15Q9NV35 164 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 MRPL16Q9NX20 251 aaKnown RBP8.75□□□□□ -1.01
PTCH1-221ENST00000550914 TP53TG3Q9ULZ0 132 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 LY96Q9Y6Y9 160 aa8.75□□□□□ -1.01
PTCH1-221ENST00000550914 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-221ENST00000550914 FAT1Q14517 4588 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 TRAV6A0A075B6T7 132 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-221ENST00000550914 IFNA5P01569 189 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms