RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 LEPP41159 167 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 RAB5CP51148 216 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 TMEM78Q5T7P6 136 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 C1orf158Q8N1D5 194 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 ARL6IP6Q8N6S5 226 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 ODF3Q96PU9 254 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 X6R8D5 127 aa11.77□□□□□ -0.53
CHMP1A-209ENST00000550872 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 A0A1W2PRE2 83 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 J3KRW8 73 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 SULT1A2P50226 295 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 UBE2G2P60604 165 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 ZNF705AQ6ZN79 300 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 TMEM208Q9BTX3 173 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
CHMP1A-209ENST00000550872 A0A1B0GV50 99 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 DEFB4AO15263 64 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 MIFP14174 115 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 GNG5P63218 68 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 ZNF492Q9P255 531 aa11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
CHMP1A-209ENST00000550872 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 GGTLC3B5MD39 225 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 ZNF138P52744 262 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 KIR3DS1Q14943 382 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 Q8NAQ8 132 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 NEU1Q99519 415 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 EPDR1Q9UM22 224 aa11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 HUWE1Q7Z6Z7 4374 aaKnown RBP11.74□□□□□ -0.53
CHMP1A-209ENST00000550872 SMIM9A6NGZ8 99 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 IFNA7P01567 189 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 Q8TAT8 98 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 LINC01587Q99440 93 aa11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 NKX6-2Q9C056 277 aaPredicted RBP11.73□□□□□ -0.53
CHMP1A-209ENST00000550872 HBE1P02100 147 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 TCRAP04437 139 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 GPX1P07203 203 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 GFI1BQ5VTD9 330 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 CST9LP1Q5W188 147 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-209ENST00000550872 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 TEX46H3BTG2 121 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 K7EQM0 130 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 PAGE4O60829 102 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 CRISP2P16562 243 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 RRN3P1Q2M238 152 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 ALKAL2Q6UX46 152 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.53
CHMP1A-209ENST00000550872 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 C7orf71A4D174 169 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 ZNF705GA8MUZ8 300 aaPredicted RBP11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 KLLNB2CW77 178 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 NMBP08949 121 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 PPT1P50897 306 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 IL17DQ8TAD2 202 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 MUC7Q8TAX7 377 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 SGK494Q96LW2 274 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 NIPSNAP3BQ9BS92 247 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 LENEPQ9Y5L5 61 aa11.7□□□□□ -0.54
CHMP1A-209ENST00000550872 LOC102723971A0A1B0GUV8 181 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 H7BYZ3 331 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 HTN1P15515 57 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 TAS2R60P59551 318 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 CCL20P78556 96 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 CYB561D1Q8N8Q1 229 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
CHMP1A-209ENST00000550872 TMEM189A5PLL7 270 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 F6UZH7 168 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 PRM2P04554 102 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 ATP5G3P48201 142 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 EMP1P54849 157 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
CHMP1A-209ENST00000550872 PEX7O00628 323 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 PRR9Q5T870 116 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 TREM1Q9NP99 234 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 RYR3Q15413 4870 aa11.67□□□□□ -0.54
CHMP1A-209ENST00000550872 TRAV34A0A0B4J273 112 aa11.66□□□□□ -0.54
CHMP1A-209ENST00000550872 CXorf65A6NEN9 183 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms